Detail



ID : Ahg917424

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|917424|Al_scaffold_0008_2175
Sequence
ATGGGAAACG GAAACTCAAG GGAGGAGGCT AAAGAATCGA GACGGTCAAA GCTACGACAG AAGCTACAAA AGTTTCGCAT TCACCGTCGT CATCTTCGTT GTTCTCGAAA CTCGTCGGCA GGAATGGTCA TACAAAGAGC TGTGTCCGCC GAGGATTTCT CCGGCATTGC GCTTCTCACT CTCATTGGCG CGGATATGAA GTTTAAAGAC AAGTGGCTCG CTTGTGTTTC TTTCGGTGAA CAGACTTTTA GAACTGAAAT CTCTGATACT ACAGAGAAGC CAATTTGGAA CTCGACAAAT AGGCTCTCAA GGAACAAAAT CATCGGTTAT TGTGAGCTTG ATATATTCGA TTTTGCAGTG CAGGAACCTG AGTCGGCGTG TAAGTCATTT GACTTGTTAG ATCCCACATC ATCCAATGTT GTTGGCACCA TTTTCCTTTC TTGCGCTATT GAGGATCCTG TTGAAACCGA GAGGCGGTTT GCAAAGCGTA TCTTGTCCAT AGTGGTGCAG GACTACAATG AAGATGGACA ACTGTCGTTT TCGGAGTTCT CTGATCTAAT AAAGGCTTTT GGAAATTTAG TGGCTGCTAA CAAGAAAGAA GAGTTGTTCA AAGCTGCTGA CCTGAATGGG GACGGTGTTG TGACGATTGA CGAGTTGGCT GTGCTTCTTG CTCTTCAACA AGAACAGGAG CCAATAATAA ATAATTGTCC GGTGTGTGGT GAGGCTCTTC AGCTCTCTGA CAAGCTCAAC GCGATGATTC ATATGACTCT TTGTTTTGAC GAAGGAACGG GTAATCAAGT GATGACCGGA GGGTTTTTGA CTGATAGACA AGCTTCTTAT GGATGGATGT TCAAACTAAG TGAATGGACA CACTTATCAA CTTATGACGT TGGTTTGAAT ACTGGTTCAA GTGCCTCATA TATTGTGGTA ATTGACCGGA AGAGTAAGAG ACTCGTGGAA GAGTTGATAG ACTCAAAGAT TGTTCTCTCC ATGAGAGCTA TTTATCAGTC AAAAATTGGA CTTCGACTTA TGGATCAAGG GGCAAAGGAG ATTCTGCAGA GACTTTCTGA GAAGCAGGGG AAGAAAATGA GCTCTGTTGA ATCCGCACAA AAAATACCAC GCTTTCTCGA GTTCTTTAAG GATCAAATAA ACATGGCTGA AGTCAAGTAT CCTCTGCAGC ATTTTAAGAC GTTCAATGAG TTCTTCATCC GGGAGTTGAA ACCTGGTGCA AGACCAATTG CTTGCATGAA AGGCGATGAT GTTGCCGTAT GTGCTGCTGA TTGTCGATTA ATGGCATTTC AGTCGGTGGA GGATAGTACC CGTTTCTGGA TCAAGGGCAA AAAGTTTTCA ATAAGAGGCC TTCTTGGGAA GAGTACTGTG AATACAAATG CCTTCCTTGA TGGATCTTTG GTGATATTCC GACTAGCACC ACAGGATTAT CATCGGTTTC ATGTCCCTGT CTCTGGAGTC ATTGAAAAGT TTGTGGATCT TTCTGGAAGC TTATATACAG TTAATCCGAT TGCGGTCAAT AGCAAGTACT GTAATGTATT CACGGAAAAT AAACGAACCG TTGCAATTAT ATCAACAGCA GAATTTGGAA AGGTTGCTTT TGTTGCAATC GGTGCGACAA TGGTTGGTAG CATAAATTTT GAGAGAAAGG AAGGAGAACA TGTGAAGAAA GGGGATGAAC TTGGTTATTT TTCATTTGGT GGAAGCACAG TTATATGTGT CTTTGAAAAG GACTCGATCC GGATCGATGA GGATCTCTTG GTTAACAGTG GTAGGTCCTT AGAGACATTA GTGAGTGTTG GAATGCAATT AGGTGTCTCC ACAAGGACAT TTGCTAGGTC TACATTGACC TAA 
Length1863
Protein Sequence
Protein Residue
Map Locationscaffold_161: 1121.. 4936
Download Sequence
A.thaliana
AGI-codeAT5G57190.1
Descriptionphosphatidylserine decarboxylase 2
TAIR curator summaryEncodes the minor form of the two non-mitochondrail phosphatidylserine decarboxylase. The gene expression level is very low. Located at the tonoplast.
Alias[PSD2][phosphatidylserine decarboxylase 2]
Gene coexpression
MR
MR Locus Description
38.9487 Ahg896878 putative pentacyclic triterpene synthase 3
41.5692 Ahg919778
55.3173 Ahg474248 transposable element gene
58.6856 Ahg943305
65.4523 Ahg348712
67.2756 Ahg887582
73.0753 Ahg334030 sugar transporter 2
73.6817 Ahg346041 Lateral organ boundaries (LOB) domain family protein
93.1451 Ahg351167 beta-galactosidase 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression