Detail


ID : Ahg918030

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918030|Al_scaffold_0008_2781
Sequence
ATGGAGAAAA AAGCTAAGGA AGAGATAACA ACAGCGTGGC ATCTTGTGAG TATGTGCAAG TCAAACACAC ATAACAGGAA GATGATGGAT GATATATTTG TAAAAGTGGA TGTTGTTCAT AGTAAAGCAA AGAAAATAAC CGCGGATGGA AAAGTCACAA ACCAGCTCCA TCAGGCTCTG ATTTCATCTT TTCAATGGAA GAAAAAGTCG TCAAAGGCAA TGAGAAGAAG ACGAGGGGAC GATTGGTTCG CATCGGAGAT TCCTTTGGAT CTCCAGATCG AGATTCTGAT TAGATTGCCT GCTAAATCGC TGATGAGGTT CAAGTGCGTT TCAAAGCTCT GGTTTTCTCT TATCCGTTCT CGATGTTTTA GCAACTGTTA TCTTAAGGTC GCATCCCCAC CGCGACCACC TCGTCTCTAC ATGAGTTTGG TGGACCACAT CCAGTGTAAT TCAATGGAAG TCTGCTATAA CCCTCGCGAG TCTGTATTGC TATCATTATC ATCATCGTCT AGTACTAATG CTAAGTCTTT CCACCAAGAT TTGGCAATGC CAGGGATGGG AGGACGCAAC ATGATGATTC TTCGCGGCTT GATTCTCTAC ATTGTTTGCA GAAAGGCGTG TATCTATAAT CCCACCACCA GACAATGTTG TAATTCAATG GAAGTCTGCT ATAACCCTTG CGAGTCTGTA TTGCTATCAT TATCATCATC GTCTAGTACT GATGCAAAGT CTTTCCACCA AGATTTGACA ATGCCAGGGA TGGGAGGACA CAACATGATG ATTCTTCGCG GCTTGATTCT ATACATTGTT TGCAGAAAGG CGTGTATCTA TAATCCCACC ACCAGACAAT GCGTAACCTT ACCCGCCGTC AAATCCAACA TTTTTGCTCA AGAAGACTAT CGTAAGAGTG TCCTCTACTT TTTAGGACAC GATCCTGTTC TTGATCAATA CAAAGTAGTT TGCACTGTTG CAGTATCCTC AAAAAGGTTT AAGAGGATAA CCTCAGAGCA TTGGGTCTTC GTCCTAGAAC CCGGAGGTTC GTGGAAAAGA ATTGAGTTTG ATCTACCTCA TTGTCCTGCA CGACTAGGAC TGTGCATCAA CGGAGTCATA TATTTTTTGG CTTCCGCTTG TATGTCTAGC GATATCCTTG TCAGTTTTGA TGTTATGTCT GAAGAGTTCA AATGGATCCA AGGACCTCCT GTCGCGTCTG CATTTAAGCC CATGGGTTTT ATAGAGTATC TTGGAAAACC ATCTGTTTTT GATCATTCCC ATCTTAAACG CAAAGGTTCC GTGGACTTAT GGGTCTTGGA AGATGCTGGA AAATGGTCGA AGAAATCCCT GGTTTTGCAG CCTTGTCAGA TGCATTTAGT TGATAAGAAA TTATCATTCA CGGTTAAAGG AAGCGGACAC GTGCGTTACC GCACGGGAAA GCGAAAACTT GAAATAGTTA AAATTGCTAA ATCGTTTAGA GTGGAAACTT GCTTATTCTA A
Length1491
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19348088.. 19351399
Download Sequence
A.thaliana
AGI-codeAT5G62660.1
DescriptionF-box and associated interaction domains-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.55744 Ahg313838 Cysteine-rich protein
13.6382 Ahg931163
13.784 Ahg950059 Cysteine-rich protein
15.906 Ahg942976
27.2947 Ahg948102 TRAF-like superfamily protein
33.7491 Ahg889574
35.0999 Ahg951803 Tetratricopeptide repeat (TPR)-like superfamily protein
41.2311 Ahg477834 sporozoite surface protein-related
45.4973 Ahg943918
47.5605 Ahg940491
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression