Detail



ID : Ahg918055

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918055|Al_scaffold_0008_2806
Sequence
ATGGAGAACT GTGTATACGA GGACCTCGAT GGGGACATGA ATGACGAAGA AATTGGCATA GCGAACAAGT ATTGGGATGC AGAAGATTTC TTTCTTAAAG GCAAAATGGA GACTGAACCT GAAACTGCAC TTTCTGGGTT TGCTGATGTT GTTAAGATGA GCCGAAACCA TGATAACTGG TGTCTCATAG CTCTTGAGCG GACTGTGCAG ATTTATTGTA GTCGGGGTGA ACACGAAAAA ATTAAGGATG TGCATAGAGA GATGCTTAAG TTTACCAAGT CTCCCTACTT TTATTCTTCC ATAACCAGTA TTACAGACTT CGTCTCTAGC TCTTTTAGCG ACAACTTTGA CCTGCTGGAA GAGTTTTATC AGACCACCTT GCAAACCCTC GAAGAGAGTA AGGGAAGCTC TCAGGCACTC TGGTTCAAAA CGAATCTGAA ACTCTGCAAC ACCTTGTTTG ACCTTCGTAA ATACCCACAA ATTAGTAAGA TCCTCAAGGA ACTCCATAAA TATTGTCAGA ATGAAGATGG CACATATGCT AAGAACAAAG GAAGTCAGGT GTTTGAGGTT TTTGCAAATG AATTTCTGCT CTACATTGAA ACAAATGATA ACAAAGATCT TAAGATGCAA CAACTGTACC AGAAGGCATT TTCCGGCAAA TTCGATACAA GTGATCATAC GGTCATTGGT ATAGTACGCG AATGTGGTGG AAAAATGCAC ATGGCAGAAC GTCAGTGGGA AGAAGCTGCC ATTGACTTCC GTGCGGCTTT TGCAAACTAT AATTTAGCTC GTAACCAGAG ACGTATAAAG TGCCTAAAGT ATGGTCTTCT GGCGAATATG ATGGGGTCGA AAGTGAATCC ATTTGACCGG GAGACTGCAA GGCGGTACGA AAACAACCCT GAGATCTTGG CAATGAAAGC TTTGATAGAA GCTTATGAAA AAAATGATTT TGCAGAGTTT CAGAGAATAT TAAAGTCCAT GGATGATCCA TTTATCAAAA CCTACTACAT GGAAGATCTA GATATGTTAA AGAAGGTGAG AACACAAGTG TTACTGAACC TGATAAAGCC ATATGCAAAT ATAGGGATTC AGTTCATATC AACGAAACTA GGCATGTCAG AGACAGAAGT TACGGAGTTG CTGAGGTCGC TGATACTCGA CAGTCAAATC GATGGGTCTA TTGATGGAGT GAACGGTTAC TTGCTGTTGA CCAAATTATA G 
Length1221
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19468389.. 19470485
Download Sequence
A.thaliana
AGI-codeAT2G26990.1
Descriptionproteasome family protein
TAIR curator summaryRepresses photomorphogenesis and induces skotomorphogenesis in the dark.
Alias[ATCSN2][COP12][CSN2][FUS12][CONSTITUTIVE PHOTOMORPHOGENIC 12][FUSCA 12]
Gene coexpression
MR
MR Locus Description
13.9642 Ahg317188 TatD related DNase
47 Ahg934176
47.7179 Ahg915666 Glutathione S-transferase family protein
49.2341 Ahg473243 inositol transporter 2
49.7192 Ahg473661 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
63.9687 Ahg479939
64.8074 Ahg480301 beta-1,4-N-acetylglucosaminyltransferase family protein
80.963 Ahg488062 pyrimidine 2
83.0843 Ahg934434 Galactose oxidase/kelch repeat superfamily protein
83.666 Ahg927049 Auxin efflux carrier family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression