Detail



ID : Ahg918637

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918637|Al_scaffold_0310_2
Sequence
ATGTCAAATT TGCTAGGACA AGGACGATTT GGGTATGTTC ATAAAGGAGT TTTGCCTTGT GGCAAAGAAG TTGCAGTGAA GAGTCTTAAA CAAGGTGAAC GCGAGTTTCA AGCAGAGGTT GATATCATTA CTCATTACTC ATTGGCTCAT TTTCTTTCGA ATCTGCGTCT ATGTGTGTAT CAGTCTTATT TTTTATATAC ACGTAGGTGG CAGATTAATT TTGGATTAGC TAAGTTATCT CAAGACAACT ATACTCATGT CTCTACTCGA GTCATGGGAA CTTTTGGATA CTTAGCTCCA GAGTATGCTT CAAGTGGAAA GTTATCCGAC AAATCTGATG TTTTCTCATT TGGAGTAATG CTTCTTGAGC TCATAACCGG ACGACCTCAT GTGGATCTAA CTGGAGAAAT GGAAGACAGC TTGGTCGACT GGGTAAGTCG GTCCCCGCCT CTTCATTCGG TTTCTTCTGC AGCAATCAGA CACTCAGCAA GAAGACGGCC TAAGATGAGC CAGGTTCAAA CACTCATACC ACTTCTTGAT TCTTTTATTG TACGAGCACT AGAAGGAGAT ATGTCAATGG AGGATCTAAG TGAAGGAACA AGACCGGGAC AAAGCACCTA TTTGAGCCCC GGAAGCGTGA GCTCGGAGTA TGATGCAAGC TCTTACAGTG CAGACATGAA AAAATTCAAG AAATTGGCGT TAGAGAATAA AGAAAAAATT CAAGAAATTG GCGTTAGAGA TGAGTATGGC TTAAATCCTT CTGCTTCAAG TAGAGAAGAA ATGAATAGAG GTTCAATGAA ACGCAATCCT AAGCTTTGA 
Length819
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2719776.. 2720894
Download Sequence
A.thaliana
AGI-codeAT4G34440.1
DescriptionProtein kinase superfamily protein
TAIR curator summary
Alias[AtPERK5][PERK5][proline-rich extensin-like receptor kinase 5]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg891831 RmlC-like cupins superfamily protein
6.245 Ahg353031 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
7.74597 Virus1678
12.6491 Virus0515
12.6491 Ahg908135 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
14.4568 Ahg344625
18.9737 Ahg918819
19.7484 Ahg356864
19.8997 Virus1893
20.4939 Virus1636
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression