Detail



ID : Ahg919325

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919325|scaffold_100606.1
Sequence
AAAAAAAGGG GAAAAGGAAA ATGGAATGTG CTCAAGTCCC AAAAGTCAAA CAAAGAAGTG TGAAATTGAA AGCGAAAGGA ATGGGCACTA GGCAGTATTC ACTGGGAGAA GTAGGGCCAC CAATAAATCC GAGAGCTGGA TTGCGAAGAG AACAAGCTGG TAGAGGTTCA TACAGAGGTA GTTAGTAGAT TCGTAGCTCA TCATTA 
Length206
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2086601.. 2087830
Download Sequence
A.thaliana
AGI-codeAT1G06149.1
Descriptionconserved peptide upstream open reading frame 8
TAIR curator summaryUpstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF8 represents a conserved upstream opening reading frame relative to major ORF AT1G06150.1
Alias[CPuORF8][conserved peptide upstream open reading frame 8]
Gene coexpression
MR
MR Locus Description
15.0997 Ahg478332 sequence-specific DNA binding transcription factors
25.0998 Ahg896890
27.9285 Ahg486715 SNF7 family protein
28.5307 Ahg890521
29.189 Virus2149
33.0908 Ahg492877
35.9166 Ahg913771
36.1109 Ahg893040 Disease resistance protein (TIR-NBS-LRR class)
38.5357 Virus0604
49.96 Ahg938069 serine carboxypeptidase-like 38
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression