Detail



ID : Ahg919443

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919443|scaffold_100724.1
Sequence
GATTCAAGAA CTAACGAAAT CATGTCTTGG ATCAAAAACC TCGTAAGAAT CTCGCAGACC ACTTCTTCGT CGGTCGGAAA CGTGTTCAGA AACCCCGAAT CCTACACTCT CTCGTCCCGT TTCTGCACCG CTCTCCAAAA GCAACCAGAC ACCGAGACGG TTCAAGCAAA GGATGTAGTT AATGGGTTGG AGTCACAGCG TTACGACGGT TTGGCTCCGA CTAAAGAAGG TGAGAAGCCG AGGGTTCTGG TTCTCGGGTC GGGTTGGGCG GGTTGTCGGC TTATGAAAGG GATCGATACG AGTATTTACG ACGTCGTTTG TGTCTCTCCT AGGAACCACA TGGTCTTCAC TCCTCTCTTG GCTTCTACTT GCGTTGGTAC CCTTGAGTTT AGGTCCGTTG CTGAACCAAT CTCTCGTATC CAACCGGCGA TTTCACGAGA ACCCGGTTCT TATTACTTCC TCGCTAATTG CTCTAAACTT GATGCTGATA ATCATGAGGT GCATTGTGAG ACTGTAACTG AAGGCTCTAG CACATTGAAG CCATGGAAGT TCAAGATAGC TTACGACAAA CTGGTACTAG CTTGTGGTGC AGAAGCATCC ACATTTGGAA TTAATGGCGT CTTAGAAAAC GCCATCTTCC TCCGTGAGGT TCACCACGCT CAAGAAATCC GTAGGAAGCT TCTTCTTAAC CTCATGCTCT CTGAAGTTCC AGGCATATCC GAAGATGAGA AGAAGAGGTT GTTGCATTGT GTTGTGGTTG GAGGTGGGCC AACTGGTGTT GAGTTTAGTG GTGAATTGAG TGATTTCATC ATGAAAGATG TTCGTCAGAG ATATTCTCAT GTGAAAGATG ACATTCGCGT TACTTTGATT GAGGCAAGGG ATATACTTTC TTCGTTCGAT GATCGGCTAA GGCACTATGC AATCAAGCAG TTAAACAAGT CTGGAGTGAA GCTTGTGCGA GGGATTGTGA AAGAAGTGAA GCCTCAGAAG CTAATCCTTG ATGATGGTAC TGAAGTTCCT TACGGTCTCT TAGTCTGGTC AACTGGTGTT GGTCCATCTT CATTTGTGAG GTCTCTTGAT TTTCCAAAAG ATCCAGGTGG AAGGATTGGT ATTGATGAGT GGATGCGTGT ACCTTCTGTA CAAGACGTGT TTGCAATTGG TGACTGTAGC GGATATCTCG AGAGCACAGG GAAATCAACA CTTCCTGCTC TTGCACAGGT GGCTGAGAGA GAAGGCAAAT ACTTGGCAAA TCTGTTTAAC GTGATGGGAA AAGCTGGAGG AGGACGAGCC AATAGCGCAA AGGAAATGGA GCTTGGAGAA CCATTTGTGT ATAAACATTT GGGAAGTATG GCTACTATTG GAAGATACAA AGCTCTTGTT GATCTCCGTG AGAGTAAGGA AGGAAAAGGA ATATCAATGG CAGGTTTTGT GAGCTGGTTC ATATGGAGGT CTGCTTATCT GACTCGAGTC GTCAGCTGGA GAAACCGTTT CTATGTTGCT ATCAATTGGC TCACTACTTT TGTCTTTGGT CGTGACATTA GCCGAATCTG ATCCAAATCT CTTCCACTTC G 
Length1571
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2468422.. 2470887
Download Sequence
A.thaliana
AGI-codeAT1G07180.1
Descriptionalternative NAD(P)H dehydrogenase 1
TAIR curator summaryInternal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.
Alias[ATNDI1][NDA1][ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE][alternative NAD(P)H dehydrogenase 1]
Gene coexpression
MR
MR Locus Description
12.1655 Ahg472139 photosystem I light harvesting complex gene 6
26.2298 Ahg494297 Mitochondrial substrate carrier family protein
27.7849 Ahg940828 magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
28.9828 Ahg472064 alpha/beta-Hydrolases superfamily protein
29.5466 Ahg352729 Glycosyl hydrolase superfamily protein
30.8221 Ahg321574
31.7805 Ahg922886
32.8634 Ahg930129 Major facilitator superfamily protein
33.4664 Ahg481465 glycine decarboxylase P-protein 2
38.4968 Ahg481283 aldehyde dehydrogenase 11A3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression