Detail


ID : Ahg919852

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919852|scaffold_101133.1
Sequence
GATCAACGGT TCAACGGACA ATGGGGCTTT CATTTGCAAA GCTTTTCAGC CGGCTTTTCG CCAAGAAGGA GATGCGAATC CTTATGGTGG GTCTTGATGC TGCTGGTAAG ACCACCATTT TGTACAAGCT CAAGCTTGGT GAGATTGTTA CCACCATTCC TACCATTGGG TTTAATGTGG AGACGGTTGA GTACAAAAAC ATCAGCTTCA CCGTCTGGGA TGTCGGGGGT CAGGACAAGA TCCGTCCCTT GTGGAGGCAC TACTTCCAAA ACACACAAGG TCTGATTTTC GTGGTTGATA GCAATGACAG AGACCGTGTT GTTGAAGCCA GAGATGAACT TCACAGGATG TTGAATGAAG ATGAGCTACG GGATGCAGTA TTGCTTGTGT TTGCCAACAA GCAAGATCTT CCAAATGCAA TGAATGCTGC TGAGATAACT GATAAGCTTG GCCTTCACTC ACTCCGGCAA CGCCACTGGT ACATACAAAG CACATGCGCA ACTAGCGGTG AAGGGCTCTA TGAAGGTCTG GATTGGCTTT CCAACAACAT TGCTAACAAA GCTTGAGGTT ATCTCGACCA GAGAGT
Length586
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3971579.. 3972679
Download Sequence
A.thaliana
AGI-codeAT1G10630.1
DescriptionADP-ribosylation factor A1F
TAIR curator summaryA member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.
Alias[ARFA1F][ATARFA1F][ADP-ribosylation factor A1F]
Gene coexpression
MR
MR Locus Description
15.6205 Ahg946644
20.8087 Ahg493124 Hyaluronan / mRNA binding family
21.8174 Ahg485482 VPS35 homolog C
22.2486 Ahg480991
39.6989 Ahg495887 MIF4G domain-containing protein / MA3 domain-containing protein
46.6369 Ahg495762 Ribosomal protein L31e family protein
53.8888 Ahg931973 Secretory carrier membrane protein (SCAMP) family protein
54.8817 Ahg940873 phosphate transporter 3;1
63.2139 Ahg491755
68.1175 Ahg935133 protein phosphatase 2A-3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression