Detail



ID : Ahg919859

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919859|scaffold_101140.1
Sequence
TCTCTCCATC CAAAAGTGAA AATGCAACCG TCGACAGGCG ATCCAGCAAT AGTGGACATG GCAGTGGCGG AGAAGGAGAA GAAGCGGCCA AGTGTATCAT TTCTTAAGCT CTTCTCCTTT GCTGATTTTT ACGATTGCGT TCTGATGGCT CTTGGATCCA TTGGTGCTTG CATTCACGGA GCCTCCGTTC CAGTTTTCTT CATCTTCTTT GGCAAACTTA TCAACATCAT CGGTCTTGCT TACCTCTTCC CACAAGAAGC TTCTCACAAA GTCGCCAAGT ACTCGTTGGA TTTTGTATAT TTGAGTGTGG TGATACTCTT CTCATCATGG TTAGAGGTTG CATGTTGGAT GCATACGGGA GAGAGACAAG CAGCGAAGAT GAGAAAAGCT TATCTCCGGT CAATGTTAAA CCAAGACATA AGCTTATTCG ACACCGAAGC TTCTACCGGA GAAGTCATCT CCGCCATCAC CTCCGACATC CTTGTCGTCC AAGACGCTAT CTCCGAGAAG GTAGGGAATT TCTTGCACTT CATAAGCCGG TTCATAGCCG GTTTTGCGAT TGGATTCGCA AGCGTATGGC AAATAAGTCT CGTCACTCTC TCCATAGTCC CACTCATTGC TCTCGCCGGC GGCATCTATG CTTTCGTCGG CACCGGACTT ATCGTCCGTG TCCGGAAATC ATACGTCAAG GCCAACGAGA TCGCAGAAGA GGTGATCGGG AATGTGAGGA CCGTACAAGC GTTTACGGGA GAAGAAAAAG CGGTGAGTTC GTACCAAGGA GCTTTGAAGA ACACTTACAA TTATGGGAGA AAAGCCGGTT TAGCTAAAGG ACTAGGACTC GGTTCGTTGC ATTTTGTTCT GTTTTTGTCT TGGGCTTTGC TCATTTGGTT CACAAGCATC GTTGTTCACA AGGGAATCGC TAGTGGTGGC GAATCTTTCA CAACCATGCT CAATGTTGTC ATCGCTGGCT TGTCTCTTGG TCAAGCGGCT CCGGACATTT CCACATTCAT GCGAGCGAGT GCTGCTGCGT ATCCGATTTT TCAGATGATT GAACGGAACA CGGAGGAGAA AACAGGTCGT AAACTCGGGA AAGTAAACGG AGACATTCTA TTCAAAGAAG TGACTTTCAA CTACCCGTCT CGTCCTGACG TGGTGATCTT TGACCAGCTA AACTTCGTGA TCCCTGCGGG GAAAGTCGTG GCTCTTGTTG GAGGAAGCGG GTCTGGGAAA AGCACCATGA TATCTTTAAT TGAACGATTC TACGAGCCTA CCGATGGGGC GGTGATGCTA GACGGGAACG ATATCAGATA CTTGGATCTT AAGTGGCTAA GAGGACATAT TGGTTTGGTT AATCAAGAGC CTGTTCTGTT TGCAACCACC ATTCGCGAGA ACATTATGTA TGGTAAAGAC GATGCCACCT CTGAGGAAAT TACCAATGCT GCAAAGCTCT CGGAAGCCAT CTCATTCATC AACAGCCTAC CGGAAGGATT CGAAACCCAG GTAGGTGAGA GAGGGATTCA GCTATCCGGC GGACAGAAGC AGAGGATCAG TATTTCTAGG GCGATAGTGA AGAACCCTTC GATTCTCTTA CTCGACGAGG CAACAAGCGC ACTAGATGCA GAGTCAGAGA AAAGCGTGCA GGAAGCTTTG GACAGAGTGA TGGTTGGGAG GACAACGGTC GTGGTGGCTC ATAGACTCTC CACCGTAAGA AACGCTGACA TCATAGCCGT TGTTGGAGGA GGGAAGATCA TCGAGTCTGG AAGCCACGAC GAACTCATCT CCAACCTTGA TGGAGCTTAC TCTTCCCTCC TTCGTATCCA GGAAGCTGCC AGCCCTAACT TGAACCACAC TCCAAGCTTA CCAGTCAGTA CAAAATTCTT GCCAGAACTA CCAATCGCAG AGACGACCTT ATGCCCCATC AATCAATCTA TAAACCAACC AGATACGACC AAACAGGCCA AAGTAACGTT GGGACGTCTT TACTCTATGA TCCGTCCGGA CTGGAAATAC GGATTATGTG GGACGTTAGG TTCCTTTATT GCAGGATCTC AAATGCCGCT TTTCGCGCTT GGGATCGCAC AGGCTTTAGT ATCTTATTAC ATGGACTGGG AAACAACTCA AAACGAGGTC AAAAGAATCT CTATCCTCTT CTGTTGTGGT TCCGTCATCA CTGTCATCGT ACATACCATT GAGCATACCA CCTTCGGTAT TATGGGTGAG CGTCTCACTC TCCGAGTCCG ACAAAATATG TTTTCAGCGA TCTTGAGGAA TGAAATCGGG TGGTTTGATA AGGTCGATAA CACTAGCTCG ATGTTGGCAT TGCGGCTTGA AAGTGATGCA ACTTTGCTTA GAACCATCGT GGTTGATAGA TCGACAATTC TCTTGGAGAA TTTAGGTCTT GTTGTGACAT CTTTCATCAT TTCTTTTATA CTAAACTGGC GTCTCACACT TGTTGTCTTG GCCACATACC CCTTAATTAT AAGCGGTCAT ATCAGTGAGA AAATTTTCAT GCAAGGTTAC GGAGGAAACC TGAGTAAAGC ATATTTGAAG GCTAACATGT TGGCTGGAGA GTCTATAAGC AACATCCGAA CCGTGGCCGC CTTTTGTGCT GAGGAGAAGG TTCTAGACCT TTATTCCAAA GAGCTTCTAG AACCTTCAGA ACGTTCTTTC AGGCGTGGAC AGATGGCTGG GATTTTGTAC GGTGTTTCTC AATTTTTCAT CTTCTCCTCC TACGGCCTTG CCCTCTGGTA CGGATCGATT TTGATGGAGA AAGGATTATC AAGTTTCGAA TCTGTGATGA AAACATTCAT GGTTTTGATA GTAACGGCGT TAGTAATGGG TGAAGTGTTG GCTCTAGCCC CAGATCTGCT TAAAGGAAAC CAGATGGTTG CATCTGTATT CGAGCTATTG GACCGAAGAA CTAAGGTTGT TGGAGATACT GGCGATGAGC TGAGTAATGT GGAAGGCACA ATTGAGCTCA AAGGTGTCCA TTTCAGCTAC CCTTCACGGC CTGATGTGAC TATTTTCAGT GATTTCAACC TAAACGTTCC TTCTGGCAAG AGCATGGCGC TTGTGGGACA AAGCGGATCT GGAAAAAGTT CGGTCCTTTC ACTCATTCTC CGGTTCTATG ATCCTACAGC CGGAATAATC ATGATAGACG GACAAGACAT CAAGAAACTG AAGTTGAAAT CACTGCGAAA ACACATCGGT CTGGTTCAAC AAGAACCGGC TCTTTTTGCA ACGACTATCT ACGAGAACAT CTTGTACGGT AAAGAAGGAG CTTCTGAGTC TGAAGTCATG GAAGCAGCTA AGCTTGCAAA CGCTCACAGC TTCATCAGCT CTCTCCCGGA AGGTTACTCA ACCAAAGTCG GTGAACGTGG CATTCAGATG TCAGGCGGCC AGAGACAGAG GATTGCTATA GCTAGAGCCG TCCTTAAGAA TCCAGAGATT CTGCTCCTTG ATGAAGCCAC AAGCGCCTTG GATGTTGAAT CAGAGCGTGT GGTACAACAA GCATTGGATC GGCTAATGAG GAACCGGACT ACGGTGGTGG TGGCTCACCG GCTATCAACA ATCAAGAACT CAGATATGAT AAGTGTAATA CAAGACGGTA AGATCATAGA GCAAGGCAGT CACAATAGCC TCGTTGAGAA CAAGAATGGT CCGTACTCTA AACTTATCAA TCTTCAGCAG CAGCAGCCCC ATCATCCTTA ATTAAGAATT ATTATTGAAT T 
Length3731
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3998379.. 4003865
Download Sequence
A.thaliana
AGI-codeAT1G10680.1
DescriptionP-glycoprotein 10
TAIR curator summary
Alias[ABCB10][PGP10][ATP-binding cassette B10][P-glycoprotein 10]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg334832 HCO3- transporter family
4.89898 Ahg351609 Protein of Unknown Function (DUF239)
6 Ahg323966
10.198 Ahg493357 baruol synthase 1
10.5357 Ahg921700 ENTH/VHS/GAT family protein
10.7238 Ahg481664 transposable element gene
10.9545 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
12.9615 Ahg936672 Protein of unknown function (DUF1216)
13.7477 Ahg488975 Leucine-rich repeat protein kinase family protein
13.8924 Ahg938376 general control non-repressible 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression