Detail


ID : Ahg920084

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920084|scaffold_101365.1
Sequence
TGGATCCGTT TATGAGCTGA ATATGAGAAA GATTCATCTT TTTCTTGTTT TGGTAAATTT CATCTACATT TCATCTTCTC TCTCCCAGAC AATCAATGAG CGAGACATTT TGCTTCAGTT CAAAGACAGT ATCAGTGACG ATCCGTACAA CAGTTTGGCT TCTTGGGTCT CCGACGGTGA CCTCTGCAAT AGCTTCAATG GAGTCACTTG TAACCCACAA GGTTTCGTGG ACAAAATCGT TCTTTGGAAC ACCAGTCTCG CCGGAACCCT AGCTCCGGGA TTGTCAAATC TAAAGTTTGT TCGAGTTCTG ACCTTGTTTG GCAACAGGTT TACAGGTAAT TTACCGTTGG ATTACTCAAA GTTGCAAACT TTGTGGACGA TTAATGTTAG TTCCAATGCG TTGTCTGGTA CGATCCCGGA GTTTATCGGT GAATTGTCTA GCTTAAGGTT TCTTGACTTG TCTAAAAATG GTTTCACCGG AGAGATTCCG GTTTCTCTGT TTAAGTTCTG TGAGAAGACC AAATTTGTTT CACTGTCTCA TAACAATCTC TCTGGATCAA TCCCTGGTAC GATCGTGAAC TGTAACAACC TCGTAGGATT TGATTTCTCT TATAATAATC TGAAGGGAGT GTTACCGCCT AGGATTTGTG ATATTCCGGT GCTTGAGTAT ATCTTAGTGA GAAACAATTT GTTGTCTGGT GATGTCTTTG ACGAGATAAA GAAATGTCAG AGGTTGATTC TTGTCGATTT CGGAAGCAAT TTGTTTCATG GATTAGCGCC TTTTGAGGTC CTTACGTTCA AGAACATAAC TTACTTCAAT GTCTCTTGGA ACCGGTTTGG TGGGGAGATT GGAGAGATAG TTGATTGCAG TGAAAGTTTG GAGTTTTTGG ATGCTTCGTC GAATGAGTTA ACTGGTAGGA TCCCAAATGG TGTTGTGGGT TGCAAAAGTC TCAAGCTTTT GGATTTGGAG TCTAACAAGC TGAATGGTAG TATCCCTGGA GGTATCGAGA AGATGGAGAC GCTCTCGGTG ATCAGATTAG GCAATAATTC TATAGATGGG GAGATACCAA GAGAGATTGG AAGTTTGGAG TTTCTACAAG TTTTGAATCT GCATAACCTC AATCTCATTG GTGAAGTTCC AGAGGATATA TCTAATTGCA GAGTACTTCT TGAACTAGAT GTTTCAGGTA ATAATTTAGA AGGAGAGGTC CCTAAGAAGC TATTAAACTT AACAAACTTA GAGATTCTTG ATCTGCATCG AAACCGTCTC AATGGAAGTA TTCCACCTGA ACTTGGAAAC CTCTCCAGAA TCCAGTTTCT TGATCTTTCA CAGAATTCAC TTTCAGGTTC AATCCCGTCT TCCCTCGAGA ATTTGCATGC ACTAACACAT TTCAATGTCT CCTACAACAA TCTCTCCGGT ATTATCCCTC CTGTTCCAGT GATACAAGCT TTCGGATCTT CTGCGTTTTC AAACAACCCT TTCCTTTGCG GTGATCCTCT TGTAACTCCC TGCAATTCTC GTGGGGCTGC AGCAAAATCC AGAAATTCTA ATGCTCTAAG CATTTCGGTT ATCATTGTTA TTATTGCGGC TGCTATTATC CTCTTTGGTG TCTGTATAGT GCTTGCTTTG AACCTAAGAG CTCGTAAAAG GAGAAAAGAT GAGGAAATAC TTACAGTGGA AACCACTCCT CTGGCGTCTT CAATTGACTC TAGCGGTGTG ATAATCGGAA AGCTTGTTCT TTTCAGCAAG AATTTGCCAT CAAAATATGA AGATTGGGAG GCGGGTACAA AAGCTTTACT CGACAAAGAA AATATAATTG GCATGGGGTC GATTGGATCA GTCTATAGAG CATCTTTCGA AGGAGGGGTT TCCATTGCAG TGAAGAAGCT TGAGACTTTG GGAAGAATCA GAAACCAAGA AGAGTTTGAG CAAGAAATCG GACGGCTTGG AGGTTTGCAA CATCCGAATC TGTCTTCTTT CCAAGGTTAC TACTTTTCCT CAACAATGCA GTTGATTTTC TCTGAATTTG TCCCTAACGG TAGCCTCTAC GATAATCTAC ACTTAAGAAT TTACCCTGGA ACCAGCTCAA GCCATGGGAA TACCGATTTG AATTGGCACA GAAGATTTCA GATTGCTTTA GGAACCGCGA AAGCGCTCTC TTTCCTACAC AATGACTGTA AACCGGCAAT TCTTCATCTC AATGTTAAGT CCACCAACAT TCTTCTAGAC GAAAGATATG AGGCAAAGCT ATCGGATTAT GGGTTAGAAA AGTTTCTTCC GGTTATGGAC AGCTTCGGTT TGACCAAGAA GTTCCACAAC GCGGTTGGGT ACATTGCTCC AGAGCTAGCT CAGCAGAGTT TGAGAGTGAG TGAGAAATGC GACGTGTATA GTTATGGTGT AGTTCTTCTT GAGCTGGTTA CAGGTAGAAA ACCGGTGGAG TCTCCATCGA GAAACCAAGT CTTGATCTTG AGAGATTATG TGAGGGATTT GTTGGAAACT GGTTCGGCTT CTGATTGTTT TGACAGAAGG TTGAGAGAGT TTGAAGAGAA CGAGCTGATT CAAGTCATGA AGTTAGGACT CCTTTGTACG TCAGAGAATC CACTGAAGAG ACCGAGTATG GCTGCGGTTG TGCAGGTTCT TGAATCAATT AGAAATGGAT TTGGATCATG ATAAAGCTTT TTCCTTTTGG A
Length2691
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4822800.. 4825586
Download Sequence
A.thaliana
AGI-codeAT1G12460.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
23.1517 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
24.779 Ahg943148 Cupredoxin superfamily protein
29.7489 Ahg485020 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
32.8634 Ahg890648 proline-rich family protein
34.4674 Ahg495659 FASCICLIN-like arabinogalactan 1
43.5775 Ahg899620 arabinogalactan protein 17
47.7493 Ahg484671 expansin A5
48 Ahg942118 Protein of unknown function, DUF642
52.5357 Ahg941617 germin 3
53.8331 Ahg493180 arabinogalactan-protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression