| Annotation |
|---|
| Description | jgi|Araly1|920561|scaffold_101842.1 |
| Sequence |
CCCGCTCTAA GCACAGTATG ATGGTGAGGA GAGGTCGCGG TCGTGGTCGT GGCGGCGGAG GAATAAATCG TAGATATCTG AGTAAAGTTA TTGATTCATG CGGGAATTTA ACAACGGCGG AGGATATCGT CGATGATCTC CGTTCCAGGT ACAGTAACTT TGCCCGTTTG ACTCGGCAAG TGCTTCTGCT CAACGTCAGA CAAGTCCTTA ATGCCAGGAA CAACAAAGCT GAAGAGGAAG ATGATAGCAA CAACGGCGAT GAGGAAGCTG CTGCTGCTAA AAGGAAGAAA GTGTCTTCTT CTCCGTCTTA TTCTTCGACT TCTGAGGACG AGGACGCTGT TTACAGCGAG AAGCTGAGTC CAAGGTTTGA TTTGATCAAT GACAGTCTAC GAGATAACTA TGCCAAGCTA AACAGTTCCT TGAAGAAACC AATTGGGTCG CCTGTGGAGA AGAATGTGGA AGTTGAGACT GTGGGAAACA AAGGTAGAAG TAAGATGGCT ACAATGGGGT CGAGAAAGGA GTCTAAAGGC TCTCTTTCCG TCAGTGGAAC TACTGGTAAT GGTGAATTGG AAGTGAAGGG TGATAAAGGA CCTACTTTTA AAGATTTTGG TGGGATTAGG AAAGTGTTGG ATGAATTGGA GAGGAATGTT TTGTTCCCGA TTCTCAATCC TGAACCGTTT AAGAAGATCG GAGTTAAGCC ACCAAGCGGG ATTCTATTCC ATGGACCACC TGGCTGTGGA AAGACCAAGT TGGCTAATGC TATAGCCAAT GAAGTTGGTG TTCCGTTTTA TAAGATTTCA GCTACAGATG TGGTTTCTGG TGTCTCTGGT GCTTCTGAAG AGAATATTAG AGAGCTTTTC TCTAAAGCGT ATAGGACTGC GCCTTCCATT GTGTTTATCG ATGAGATTGA TGCGATTGGA TCAAAGAGGG AAAATCAGCA AAGGGAGATG GAGAAGCGGA TTGTAACGCA ATTATTGACT TGTATGGATG GACCTAGTAA CAAAGGTCCT GAGTCTAGTG CTGGATTTGT TCTCGTCATT GGAGCTACAA ATAGGCCTGA TGCTCTGGAT CCTGCTTTGA GAAGAAGTGG ACGATTTGAG TGTGAGATCG CTCTGAGTGT TCCAGATGAA GATGCAAGGG CTGAGATCCT CTCTGTTGTA GCCCAAAAAC TTAGACTAGA AGGGCCCTTT GACAAGAAAA GAATAGCTCG TTTAACACCG GGGTTTGTTG GAGCCGATTT GGAGGGTGTT GCTAACATGG CTGGCAGGAT AGCCACAAAG AGGATCTTGG ATTTAAGAAA ATCTCAACTG TCTGAGAACG GTGAAGATGA TGATAATTCT TGGCTGAGGC ATCCCTGGCC AGAAGAAGAG TTGGAAAAAC TCTTTGTCAA GATGTCTGAT TTTGAGGAAG CAGTGAATCT AGTTCAAGCA TCTTTGACAA GAGAAGGATT CTCTATCGTG CCTGATGTCA AGTGGGATGA TGTTGGTGGA CTTGAGCATC TACGACTTGA ATTCAACCGT TATATAGTCA GACCTATCAA AAAGCCTGAT ATTTATAAGG CTTTTGGGGT AGACTTAGAG ACAGGATTTT TACTCTATGG ACCACCTGGT TGTGGCAAGA CATTGATTGC AAAGGCGGTT GCCAACGAGG CAGGAGCTAA TTTCATGCAC ATAAAGGGTG CAGAACTTCT AAACAAATAC GTTGGAGAGA GCGAGCTTGC TATTCGGACA TTGTTTCAGC GGGCCCGGAC ATGCTCGCCA TGTGTAATCT TCTTTGACGA GGTGGATGCT TTGACAACAA GCCGTGGCAA AGAAGGTGCC TGGGTTGTTG AGCGGCTTTT AAACCAGTTT CTTGTTGAGC TGGATGGTGG AGAGAGGCGT AATGTATATG TAATTGGAGC TACAAACAGG CCAGATGTAA TTGATCCTGC GTTCTTGAGA CCCGGTAGGT TTGGGAATCT TCTATACGTA CCCCTCCCTA ACGCGGATGA ACGTGCTTCA ATTTTAAAAG CTATCGCAAG GAAGAAGCCC ATAGATCCTA GTGTTGATCT GGATGGCATT GCAAAGATGA AATGTGAAGG TTTCAGCGGA GCTGATCTTG CTCACTTGGT GCAAAAAGCT ACATTCCAGG CAGTGGAGGA GATAACAAGT TCCGGTGAAG ATGATGATGA TGATATTACA GATACAAGTC AGTGTACGAT TAAGATGACT CATTTCGAGC AAGCCTTGTC CTTAGTCTCA CCTTCTGTGA ACAAACAGCA AAGAAGACAC TACCAGGAAC TATCGGTAAG ACTCCAAGAA AGCAGTGGAA GGAAACCATA GGACCACCTT TGCCATACAC G |
| Length | 2341 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 6628518.. 6631081 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G01610.1 |
| Description | cell division cycle 48C |
| TAIR curator summary | AAA-type ATPase - Over 90% homologous to CDC48a |
| Alias | [CDC48C][emb1354][cell division cycle 48C][embryo defective 1354] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.23607 |
Ahg927711 | N2,N2-dimethylguanosine tRNA methyltransferase |
| 3.4641 |
Ahg941230 | Alkaline-phosphatase-like family protein |
| 35 |
Ahg481323 | ubiquitin-specific protease 19 |
| 39.6863 |
Ahg344958 | DNA repair-recombination protein (RAD50) |
| 43.4511 |
Ahg473060 | |
| 45.0333 |
Ahg484160 | NAC domain containing protein 35 |
| 46.1519 |
Ahg943577 | |
| 46.7868 |
Ahg477953 | DEAD box RNA helicase family protein |
| 49.1325 |
Ahg482131 | CVP2 like 1 |
| 55.1362 |
Ahg473319 | ribosomal protein L2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|