| Annotation |
|---|
| Description | jgi|Araly1|920592|scaffold_101873.1 |
| Sequence |
ACGTTCTTTA AGTAACCAAA ATGGGTTCGA GATACCCATC TCATCAGCTC AGCAATGGAC TATTTGTGTC TGGTCGGCCT GAGCAACCCA AAGAAAGGCC TCCAACTATG AGTGCAGTAG CCATGCCTTA CACGGGTGGC GACATCAAGA GATCAGGAGA ATTGGGGAAG ATGTTTGATA TCCCAGCAGA TGGTACTAAG TCTAGGAAGT CTGGTCCCAT ACCTGGTGCT CCTTCAAGGT CTGGCTCATT TGCAGGAACT GCACAATCTG GTCCAGGTGC TCCTATGGCC ACTGGCCGTA TGTCTGGCTC TTTAGCTTCT GCTGGCTCTG TTTCAATGAA GAAAACTAAT TCCGGACCTT TATCTAAGCA TGGAGAGCCT TTAAAGAAAT CATCTGGCCC TCAATCTGGT GGTGTAACTC GGCAAAATTC CGGTTCTATT CCTATTCTTC CGGCTACAGG TCTCATAACC TCTGGGCCTA TTACATCGGG CCCTCTGAAT TCATCTGGGG CTCCCAGGAA GGTTTCTGGT CCACTAGACT CTTCTGGTTT GATGAAGTCA CATATCCCTT CTGTTGTCCA CAACCAGGCG GTAACTACCC TTGGTCCAGA AGATGACTTT TCCTGCCTGA AGAGCTTCCC AAAGCCTGTG CTGTGGCTGG TTGTTCTTAT ATTCATAATG GGGTTCCTTG CTGGAGGCTT CATTCTTGGT GCAGTTCACA ACCCAATTCT CCTCGTTGTT GTCGCGATCT TGTTTACAGT TGTTGCTGCG CTTTTCATTT GGAATATTTG TTGGGGGAGA CGTGGTATCA CAGATTTCAT TGCTCGTTAT CCTGATGCTG ATCTTAGAAC TGCCAAAAAT GGTCAATACG TGAAGGTCAC TGGGGTGGTT ACTTGTGGTA ATGTACCGCT TGAGTCATCC TTCCACAGAG TTCCTAGATG TGTGTACACA TCGACATGTC TATATGAGTA TCGTGGATGG GGTTCGAAAC CAGCCAATTC TTCCCATCGT CACTTCACAT GGGGACTGAG ATCATCAGAG AGACATGTGG TGGACTTTTA CATCTCTGAT TTCCAGTCTG GGCTCAGAGC CTTAGTCAAA ACCGGAAGCG GTGCAAAGGT AACACCTCTT GTAGATGATT CTGTTGTCAT CGATTTTAAG CAAGGAAGCG AGCAAGTGTC TCCCGATTTT GTTAGATGGT TAAGTAAGAA GAATCTAACA AGCGATGATC GAATAATGCG GCTCAAAGAA GGGTATATAA AAGAAGGAAG CACAGTGAGT GTGATTGGAG TGGTGCAGAG AAACGATAAT GTGTTGATGA TAGTTCCATC ATCTGAGCCA CTAGCAGCTG GTTGGCAATG GAGGAGATGC ACATTCCCTA CAAGTCTTGA AGGAATCGTA TTGAGATGTG AAGACTCATC CAATGTTGAT GCCATACCGG TTTGAGTCAT CATCATCATC ACCAA |
| Length | 1465 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 6728015.. 6729932 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G16858.1 |
| Description | conserved peptide upstream open reading frame 55 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF55 represents a conserved upstream opening reading frame relative to major ORF AT1G16860.1 |
| Alias | [CPuORF55][conserved peptide upstream open reading frame 55] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 14.6969 |
Ahg478905 | Plant protein of unknown function (DUF641) |
| 23.1733 |
Ahg928939 | Leucine-rich repeat (LRR) family protein |
| 26.6083 |
Ahg492992 | Leucine-rich repeat (LRR) family protein |
| 28.5307 |
Ahg471002 | Protein phosphatase 2C family protein |
| 31.3688 |
Ahg921783 | no pollen germination related 1 |
| 37.47 |
Ahg358424 | |
| 38.9358 |
Ahg917292 | Leucine-rich receptor-like protein kinase family protein |
| 44.0681 |
Ahg495659 | FASCICLIN-like arabinogalactan 1 |
| 46.9894 |
Ahg903841 | IQ-domain 1 |
| 48.3735 |
Ahg933944 | Domain of unknown function (DUF23) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|