Detail



ID : Ahg920634

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920634|scaffold_101915.1
Sequence
ACCAAAGCTA ACTTGTAAAA ATGAGAGGGA GGATATGTTT CTTGGCAATA GTAATTCTCT GTTCTTTCTC CTTCATCTTA GTAAGATCCT TAAACAAAGA AGGGCGAGTT CTTCTGGAGT TTAAAGCTTT CCTTAATGAC TCGAATGGTT ATCTCGCAAG CTGGAACCAG TTGGATTCAA ATCCCTGCAA CTGGACCGGA ATCGAGTGTA CCCGCATCAG AACGGTAACT TCTGTTGATT TAAATGGAAT GAATCTATCA GGTACACTAT CTCCTCTCAT ATGCAAGCTT CATGGTTTAA GGAAATTGAA TGTCTCCACC AACTTCATCT CTGGTCCAAT CCCTCGAGAT TTATCTCTCT GTCGAAGTCT AGAGGTTCTT GATCTCTGCA CAAATAGGTT CCATGGAGTG ATACCAATTC AGCTAACTAT GATCATCACT CTTAAGAAGC TGTATCTATG CGAGAATTAT CTTTTCGGTA CAATCCCTAG ACAAATAGGT AGTTTGAGTT CGCTCCAAGA GCTTGTGATC TACAGCAACA ATCTCACCGG TGTAATCCCT CCTTCCACGG GGAAATTGAG ACTGCTCCGG ATCATTAGGG CAGGACGGAA TGCATTCTCG GGTGTGATTC CATCTGAAAT CAGCGGATGT GAGAGCCTGA AGGTACTTGG ATTAGCAGAG AATCTTCTTG AGGGTTCTCT TCCTATGCAG CTCGAGAAGC TTCAAAATCT TACTGATCTG ATACTCTGGC AAAACCGTCT ATCCGGTGAG ATACCTCCTT CGGTAGGAAA CATCACCAGA CTGGAGGTGC TTGCGCTGCA CGAAAACTAC TTCACGGGAT CAATTCCAAG AGAGATTGGG AAGCTCACAA AGATGAAAAG GCTGTACCTT TACACAAACC AGTTAACCGG AGAGATACCT CATGAAATAG GCAACTTGAC AGATGCAGCT GAGATAGATT TTTCGGAGAA TCAGTTAACA GGTTTCATCC CAATAGAGTT TGGTCAGATC CTGAATCTAA AACTACTTCA TCTTTTTGAG AACATTCTTC TAGGTCCAAT TCCTAGGGAG CTTGGGGAAT TGACACTGTT GGAGAAGCTA GACTTGTCTA TCAATAAACT AAATGGTACT ATCCCGCGAG AGCTTCAGTT CCTACCTTAC CTTGTCGATT TGCAGCTTTT TGACAACCAG CTTGAAGGGA CGATACCTCC TCTAATCGGT TTCTATAGCA GTTTTTCTGT TCTTGACATG TCTGCCAATT CTCTGTCTGG TCCAATTCCA GCCCATTTCT GCAGATTTCA GACGCTAATA CTTCTGAGTG TTGGTTCAAA CAAGTTATCA GGAAACATCC CTCGTGATCT GAAAACCTGC AAGTCACTGA CAAAGCTAAT GCTAGGCGAT AACTGGCTAA CAGGAAGCCT TCCCGCTGAA TTATTTAATC TTCAGAACCT TACTGCATTA GAGCTTCACC AAAACTGGTT ATCAGGGAAT ATATCTGCAG ACCTGGGGAA GCTGAAGAAT TTAGAAAGAC TGCGTCTAGC TAACAACAAT TTTACTGGTG AAATTCCTCC TGAGATTGGG AATCTCACAA AGATTGTTGG CTTAAACATC TCCTCCAATC AGCTCACTGG TCACATCCCT AAAGAATTGG GGAGTTGTGT CACTATCCAG AGACTTGACC TTAGTGGAAA CAGGTTTTCC GGGTACATAC CACAAGATCT TGGTCAGTTG GTGAATTTGG AGATTTTGAG ATTGTCTGAT AATAGATTGA CAGGAGAAAT TCCTCATAGC TTTGGAGATC TAACTCGGCT CATGGAGTTA CAACTAGGAG GCAATCTCTT GTCTGAAAGC ATCCCAGTGG AGCTCGGAAA GTTAACCTCT CTGCAAATCT CCCTCAACAT TAGTCACAAT AATCTCTCAG GTACGATTCC AGACAGTTTA GGAAATCTAC AAATGTTGGA GATACTTTAC CTCAACGACA ACAAGCTATC AGGTGAGATC CCTGCATCAA TTGGGAATCT CATGAGCCTC CTCATCTGCA ATGTCTCAAA CAATAACTTG GTCGGAACAG TACCAGACAC AGCCGTGTTC CAGCGGATGG ATTCATCAAA CTTTGCTGGA AACCACGGTT TGTGTAACTC TCAGAGCAGC CACTGCCAAC CACTTGTCCC ACATTCTGAT TCAAAGCTAA GTTGGTTAGT CAATGGTTCG CAGAGGCAAA AGATCTTGAC AATCACTTGT ATGGTAATCG GCTCGGTTTT TCTTATCACT TTTCTTGCTA TCTGTTGGGC AATAAAGCGG CGGGAACCAG CGTTTGTTGC ACTTGAGGAT CAAACAAAAC CAGATGTCAT GGACAGCTAC TATTTCCCTA AAAAAGGTTT CACATATCAA GGCCTTGTGG ATGCAACCAG AAACTTTTCC GAAGACGTGG TTTTAGGGAG AGGAGCGTGT GGAACTGTCT ACAAAGCTGA AATGTCAGAT GGCGAGATGA TAGCTGTAAA GAAGCTAAAT TCTCGCGGCG AAGGAGCTAG TTCTGATAAT AGCTTCAGAG CTGAAATATC AACACTTGGA AAGATAAGGC ACCGGAATAT TGTGAAGCTA TATGGTTTCT GCTATCACCA GAACTCAAAT CTTCTCTTGT ATGAGTACAT GTCAAAAGGA AGCCTCGGCG AACAACTACA GCGAGGTGAG AAAAACTGCT TGTTGGATTG GAATGCTCGG TATAAAATCG CCCTCGGTGC TGCAGAGGGT CTGTGTTATC TCCATCATGA TTGCAGACCT CAAATAGTTC ATCGCGACAT AAAATCGAAC AACATTCTTC TTGATGAACT GTTCCAGGCT CATGTTGGAG ATTTTGGCCT GGCTAAGTTG ATTGATCTCT CTTACTCAAA GTCCATGTCA GCTGTTGCTG GGTCTTACGG ATACATCGCT CCAGAATATG CTTACACGAT GAAGGTGACA GAGAAATGCG ATATCTATAG CTTTGGAGTT GTGCTTCTGG AGCTAATAAC AGGAAAGCCC CCAGTTCAAC CGCTGGAGCA AGGAGGGGAT CTAGTCAATT GGGTTAGAAG ATCAATTCGT AACATGGTTC CAACCATTGA AATGTTTGAT GCGAGGCTAG ATACGAATGA TAAGAGAACA CTTAATGAGA TGTCTCTAGT CCTAAAAATT GCACTGTTCT GCACCAGCAA CTCTCCAGCT AGTAGACCAA CAATGAGAGA AGTTGTCGCT ATGATTACAG AAGCTCGGGG ATCAAGCAGC CTCTCTACCT CATCCATTAC ATCAGAAACT CCTCTAGAAG AAGCAAACTC CTCCAAAGAA ATTGACTTTG TTGCATCACC TTGAAGTCAG CAAATAAATC CAGTT 
Length3365
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6863953.. 6867476
Download Sequence
A.thaliana
AGI-codeAT1G17230.1
DescriptionLeucine-rich receptor-like protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.5945 Ahg941792 Alanyl-tRNA synthetase, class IIc
19.7484 Ahg331018 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region
22.8473 Ahg949632 ARM repeat superfamily protein
23.0434 Ahg487073 alpha/beta-Hydrolases superfamily protein
23.4947 Ahg472321 xylem cysteine peptidase 2
24.8998 Ahg471148 glutathione S-transferase TAU 18
25.8263 Ahg481549 plectin-related
28.5657 Ahg491210 O-Glycosyl hydrolases family 17 protein
29.5635 Ahg485693 glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases
37.4166 Ahg907740
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression