Detail



ID : Ahg920999

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920999|scaffold_102280.1
Sequence
TGTTAGATAT AAAAGCATAA AATGGAAGAG ATTATATTAC ATAGTATATC CAGCGAAAAA GAACCCGTCG CCGGCGAATC AGCCGGCTTG CCCAACGGCC TAGTAAGTCA TGGTGACTCT AAGACACGGC GCGTATACGA AACAGCTCGA TCTCTGCATT CCGGTGCTGT GAAAGATCTT CTATCTCTCG GGGTCTGCGA GAGATGTATT TTCCGATTGG TAGCCGTCGA GGCTTTTGAT TCCGATATTT CTTCAGTCTC GACTTCAACT CTTCACAGTT GGCTCAAATC CGGTGATGGT GAAACTGGTT CATCGGAATC TAGCTGTTCC AGAATCTGCA TTGTTTGTTT AGGTATATTG CAGTTCGTTT TTTCCGATGC CAAAAAAGAG CTGGTGAAAT CGGATTCTAG TAGTGATTAC GTTTCAAGGA TAACGGACTT GGTGAAGCAG GATCGTCATG AGTTCGATAG CTTTGGTCTT GAAGTCTCTG TGCCATCAAC TATCATGGAG AATGAACGTG CACTCTTGTC ATACCTTAAA GGAAAGTATA GCACCGAAGT TTGGCTGCAA CGCGACAAAT TTTCTGTAAA GGATGCTTTG AAAGTTCTAC TCTTGGATCA ACTTAAAGCA TCGTTGGGCG CTGAATCAGA TTCAAGCTCT TTTCACATCC GTTTGACATA CACTAAAGCA TCAGACGAGG CTCAGGGTGC TTCTGAAACA ACGCATGAAA GTAAGAGGAG GAAAACAGAC GCAGAGAATG GTTCAAACTG TATTTCCGAG AATTCATTTG AAAAGGTGTA TGAACCATGC ATCTTTTCAG TTCATTGCAA CAGGATGCCT ATCTTTTTTA GTGGGAGATA CTTCAAATAC TCCAGAAATG TTAGTCAATC ACGATGGATT ATTGATGATG AAAGAATGGG AGAAGCGTCT GTTGAGGAGA TAATTGGTGG AAACATTCTT CCAGCATGCC TTGGGGATTC CTACAAGTTC CATGCAGCTG GCAGAGAAGA TATTGATGTA CGAATGTTGG GTTCAGGTAG ACCTTTCTTG ATCGAGGTTC AGAATTCTCG CCAGTTGCCG TCTGAACAAT CATTGAAGGA AGTTGAAGAA AAGATAAACA AGTCAGAGAA AAAACTATCA GTGTTGGGCA ATGATGCGCT AGGGAGAAGC GGAGAAAAGC AGTATGTTGC ACTTGTATGG ATTTCTCGTC CACTTGAAGA GAAAGACTTC AACTCAATTC CTTCCCTGAA AGAATTGAAA ATCTTGCAGA AGACACCAGT TAGAGTGCTT CACCGACGAA GTCCACTGGA CCGTGAAAAG ATTATACATT GGATGAAAGT TGAAAAGATA AAAGGACACT CTAACTACTT TCTATTGCAT CTGTGCACCC AGGCTGGAAC ATACATCAAA GAGTTTGTTC ATGGAGATCT TGGTCGTACC ACTCCCAGCA TGGGATCAAT TTTAGGGTGC AGAGCGGAGA TAATACAACT AGATGTGACT GATGTGAAAA TGGGCGACCC ATGAATTGCC AAGTAAAAGC CCGATGCTCT TC 
Length1552
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8290228.. 8294028
Download Sequence
A.thaliana
AGI-codeAT1G20410.1
DescriptionPseudouridine synthase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.8564 Virus1318
20.4939 Virus0490
25.5147 Ahg930512 transposable element gene
27.1293 Ahg473321 ribosomal protein L22
35.9444 Ahg912295
37.9605 Ahg894590
72.2288 Virus1400
73.1095 Ahg924852
76.2693 Ahg943178
77.5629 Ahg887750 F-box/RNI-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression