Detail



ID : Ahg921263

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921263|scaffold_102544.1
Sequence
CACAACTCAC CCCTTTCCCC ATGACTCCAC GTGGACACAT CGGAATGCTG ACATCACCAA TCCTAGATCA CGGTGCAACC ACCGCGTCAT CATCATCATT CTCCATCCCT CAGCCACGTT ACTTGCTGAC TCAACATCAC CAGCCCTACA ACATGTACAA CAACAACTCT CTAAATATGA TCAATAGAAG CTCATCCGAT GGTACTTTCG TAAATCCAGA GCCATCATCA TCATTCCCCG GATTTGGTTA TGATATGTCA CAAGCTTCTA CATCAACTTC TTCTTCCATT AGAGATCATG GATTGCTTCA AGATATTCTT CCTTCGCAGA TCAGATCCGA TACTATTAAC ACTCAAACCA ATGAAGAGAA TAAGAAATGA GCAACTTTTT TTTCCCGGGG 
Length400
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9396085.. 9396484
Download Sequence
A.thaliana
AGI-codeAT5G49520.1
DescriptionWRKY DNA-binding protein 48
TAIR curator summaryEncodes WRKY48, a member of the WRKY Transcription Factor. WRKY48 is a stress- and pathogen-induced transcriptional activator that represses plant basal defense.
Alias[ATWRKY48][WRKY48][ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 48][WRKY DNA-binding protein 48]
Gene coexpression
MR
MR Locus Description
27.9821 Ahg483244 Glycosyltransferase family 61 protein
73.5255 Ahg472567 Polyketide cyclase/dehydrase and lipid transport superfamily protein
84.8351 Ahg491590 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression