Detail



ID : Ahg921438

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921438|scaffold_102719.1
Sequence
AAATAATAAT AAAAAATGAA ATGATATGTT CAGTGTTACG CTCTTCTCTT CCTTATATCT TCAGCTTCAC TTCACATCAA AATCACCACC TCTCCTCAAA AACCCTAATT CCTCTCTCTC ATTTCTCGGA GATATTCACC AGAGCATTAA CCATGGATGC TAAAGAATCC TCCGCCACCG ATTTGAAAAG ACCGAGAGAA GAGGATGATA ACGGCGCCGC CGCAACCATG GAGACGGAGA ACGGAGATCA GAAAAAGGAG CCTGCTTGTT TCTCCACTGT CATTCCTGGC TGGTTCTCTG AAATGAGTCC TATGTGGCCA GGAGAAGCAC ACTCATTGAA GGTTGAGAAA GTTTTGTTTC AAGGGAAATC AGATTATCAA GATGTGATTG TTTTCCAGTC TGCAACATAT GGAAAAGTTT TGGTTTTGGA TGGAGTAATC CAACTTACCG AGAGAGATGA ATGTGCCTAT CAAGAAATGA TCACTCATCT TCCTTTGTGC TCTATTCCTA ACCCTAAGAA GGTCTTGGTT ATTGGAGGAG GAGATGGAGG TGTCCTGCGG GAAGTTGCAC GCCATGCTTC TGTTGAGCAG ATTGACATGT GTGAAATTGA TAAAATGGTG GTCGACGTGT CTAAGCAATT TTTCCCTGAT GTAGCAATTG GATACGAGGA TCCTCGCGTG AACCTTGTCA TTGGCGATGG TGTTGCTTTC TTGAAGAATG CTGCTGAAGG ATCATACGAT GCGGTTATTG TTGACTCTTC AGATCCAATC GGTCCTGCAA AGGAGCTATT TGAGAAACCC TTCTTCCAAT CCGTGGCTAG AGCTCTTCGT CCTGGTGGGG TTGTGTGTAC TCAGGCTGAA AGCTTGTGGC TTCACATGGA CATCATCGAA GACATTGTTG CAAACTGCCG TGAGATCTTC AAGGGTTCTG TGAACTATGC CTGGACCAGC GTTCCAACAT ACCCCAGTGG GGTTATTGGA TTTATGCTTT GTTCTACTGA GGGACCTGAT GTTGACTTCA AACACCCACT GAACCCAATT GACGAGAGCT CAAGCAAATC AAATGGACCT TTGAAGTTTT ACAATGCCGA GATTCATTCA GCCGCATTCT GCTTGCCTTC TTTCGCCAAG AAGGTAATTG AGTCAAAAGC CAATTGAAAA GAGAAAGAAA ACTAATCT 
Length1178
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10011964.. 10014521
Download Sequence
A.thaliana
AGI-codeAT1G23820.1
Descriptionspermidine synthase 1
TAIR curator summarySpermidine synthase.
Alias[SPDS1][spermidine synthase 1]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg336036
10.3923 Ahg470308 debranching enzyme 1
16.3095 Ahg950808 4-hydroxy-3-methylbut-2-enyl diphosphate synthase
16.8523 Ahg477961 O-acetyltransferase family protein
18 Ahg482373
21.4243 Ahg927270 Sodium Bile acid symporter family
23.9165 Ahg489110 alkaline/neutral invertase
24 Ahg494959 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase
24 Ahg933590 photosystem II subunit P-2
25.0998 Ahg483030 isoamylase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression