Detail



ID : Ahg921495

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921495|scaffold_102776.1
Sequence
GGGTGTGTAA GCAAAATCAA ATGGAGTGGG ATAGTGATTC CGATCTCAGC GGGGGAGATG AAGTGGCGGA GGATGGATGG TTCGGCGGAG GTAACAGAGC GATTCCGTTT CCGGTAGGTA GTCTTCCTGG AACGGCGCCG TGTGGTTTTG TGGTCAGCGA TGCTCTTGAA CCTGATAACC CTATCATTTA TGTTAACACT GTTTTTGAGA TTGTTACTGG TTATCGAGCT GAGGAAGTTA TTGGTCGAAA TTGGTGAGTT TTCTCTTCTT GACTTTTAC 
Length279
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10259900.. 10260178
Download Sequence
A.thaliana
AGI-codeAT2G18915.2
DescriptionLOV KELCH protein 2
TAIR curator summaryencodes a member of F-box proteins that includes two other proteins in Arabidopsis (ZTL and FKF1). These proteins contain a unique structure containing a PAS domain at their N-terminus, an F-box motif, and 6 kelch repeats at their C-terminus. Overexpression results in arrhythmic phenotypes for a number of circadian clock outputs in both constant light and constant darkness, long hypocotyls under multiple fluences of both red and blue light, and a loss of photoperiodic control of flowering time. Although this the expression of this gene itself is not regulated by circadian clock, it physically interacts with Dof transcription factors that are transcriptionally regulated by circadian rhythm. LKP2 interacts with Di19, CO/COL family proteins.
Alias[ADO2][LKP2][ADAGIO 2][LOV KELCH protein 2]
Gene coexpression
MR
MR Locus Description
6.85565 Virus3888
18.1659 Virus3561
29.9333 Ahg356864
41.7612 Virus0316
41.7612 Virus3474
51.7687 Ahg484308 basic leucine-zipper 48
55.1815 Ahg930018
65.9545 Virus3109
66.873 Virus3086
71.2881 Virus0598
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression