Detail



ID : Ahg921522

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921522|scaffold_102803.1
Sequence
CACTGAAGCG GTTTGAGAAA ATGGCCGAAC ACGGTGAGAC TCAAGCTGAT GAAGAAGAAG AACAGCAAGT ATGGAGCTGG GGAGCTGGTA CGGACGGACA GTTAGGTACG GCTAAGCTGC AAGACGAGCT TCTCCCGCAG CTTCTCTCTC TGACGTCACT TCCTTCCATA TCTATGCTCG CCTGTGGCGG CGCTCACGTC ATCGCTTTGA CTTCTGATGG GAAGGTCTTC ACATGGGGAA GAGGAAGCTC TGGTCAGTTA GGACATGGAG ACATCCTCAA CATTACTTTG CCAAAGCTTG TATCTTTCTT TGACGGCTAT GTTATTACTC AAGCCGCAGC TGGATGGAGT CATTCTGGTT TTGTTTCAGA TTCTGGTTGT CTTTTCACAT GTGGTAATGG CTCATTTGGT CAGCTTGGTC ATGGTGATAA CATGTCATTA AGCACTCCAG CTAAAGTCTC TTACTTTAAC AATGAGAGTG TGAAGATGGT AGCTTGCGGT ATGCGCCACT CACTTGTCTT GTTTGCAGGG AATCAAGTGT GCGGATTTGG ATCTGGAAAA CGTGGACAGT TAGGTTTCAC ATCAGACGGA ACAAAATCAG TAAATCTTCC ATGTGTTGTC TCTGGATTAA AAGATGTTGA GGTTACTCGT ATACCAGCTA ATGGAGATCA TAGTGCAGCT ATATCTGCTG ATGGACAGTT CTTCAGTTGG GGAAGAGGAT TCTGTGCTGG CCCTGATGTT CAAACCCCTC AGTGTTTGCC TTCATCTCTA TCTTTCAGAG AAGTTGCTGT AGGATGGAAT CATGCTTTAC TACTAACCGT CGATGGCGAG GTTTTCAAGC TTGGTAACAC CCTTAATAAA CAACCTGAGA AGCAACAACT GCAAATAGAT TCCTCTGAAG CTCTCTTGGC GAAAGTTTCA GATTTTGATG GAGTTAAAGT TCTGCAAATT GCAGCAGGAG CAGAGCATTC TGCTGCCGTA ACAGAGATTG GAGATGTTAA GACATGGGGA TGGGGTGAAC ATGGTCAGCT AGGCCTTGGA AATACCAATG ATCAGACCAG TCCTCAACTG GTGAGCCTAG GAAGTATAGA CCTGCGAACG AAAGAGATCA AAGTATATTG CGGAAGTGGA TTTACTTATG CAGTAAGGCG AAAGCAAGGG CTTTCTTCGT CACCAACCTC TTCATAGACA TGGATATATG ACATCTTATG T 
Length1211
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10383137.. 10384814
Download Sequence
A.thaliana
AGI-codeAT1G27060.1
DescriptionRegulator of chromosome condensation (RCC1) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.48074 Ahg951033 ubiquitin-conjugating enzyme 3
38.3797 Ahg322779 Protein of unknown function (DUF707)
54.5985 Ahg919342 Pentatricopeptide repeat (PPR) superfamily protein
56.5862 Ahg492924 Protein of unknown function (DUF1218)
70.4202 Ahg952033 Cyclase family protein
76.7463 Ahg491051 early-responsive to dehydration stress protein (ERD4)
81.4125 Ahg935611 cyclic nucleotide gated channel 3
81.4616 Ahg935107 protein kinase C substrate, heavy chain-related
99.7497 Ahg475187 S-locus lectin protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression