| Annotation |
|---|
| Description | jgi|Araly1|921800|scaffold_103081.1 |
| Sequence |
CGGTGGAGTG AGATTATCTG ATGGCGTCAA TCCGGCGAAC TCTCTCGCCG ATGTATCACG ATCGTTCTCA CGAGAATGGA GGTTCACACA AGGGTTTCAC CATTGGTGGT AGTAGCAGTA AACACAATTC TTCGCAATTT CTTTCGTATC TCACCAAACT CCTCGGAGTA ACATCTGATC CTAAAAGCTC GCGTAGAGGT CCATGGCGGC GACCGTTTTA CCAGTTTCTC GTCTTCTTTC TTCTTGGATT TGTATTAGGT TTGACACCTT TCGGAAAAAT GGAAGATGTA AACGGTTCCG ATCGATTCTC CTTCGAGATC AAACAGCCCT ACGTTGAAGA ACGGTTGGAT AACAACAAGA AACGGGAAGA GGTAGCTGTA GATGCGGTGA GTTTCGTGGC GGAGACTGAA AATGGGAAGG AGGAGGTCAA TTTTGTGCCG AAGAAGCTTA TAATTGTGGT CACACCAACG TATAATCGAG CGATGCAGGC GTATTACTTG AACAGGATTG CTCAAACGCT GAGACTTGTT GAGTCGCCTG TGCTGTGGAT AGTGGTGGAG GGTAACGTGG CGTCGTTTGA AACCTCAGAG ATTCTGAGGA AGACGGGAGT GATGTACAGG CACTTGGTTT GCAAGAGGAA CATGACGAGT ATTAAGGATA GAGGAGTTCA TCAGAGAAAC ACCGCATTGG AACATATTGA GTTGCATAAG CTTGATGGAA TTGTCTACTT TGCTGATGAT GACAATATCT ACTCGCTTGA GCTCTTTCAA AGCTTAAGAC AAATCAGCCG ATTTGGAACA TGGCCTGTTG CGATGCTCGC ACCAAGCAAA AACAAGGCCA TCCTTGAAGG TCCAGTATGC AATGGAAGTC AAGTAATAGG ATGGCACACT AATGAAAAGA GTAAAAGACT ACGGAGGTTC CATGTTGATA TGTCGGGATT TGCTTTTAAC AGCACTATAC TCTGGGACCC TAAAAGGTGG CGACGTCCCT TTTCACATCC AACCCGCCAA CTGGACACAG TGAAGGAGGG CTTCCAGGAG ACATCATTTA TAGAGCAGGT GGTGGCTGAT GAAAGCGAGA TGGAAGGTGT TCCACCAGCT TGCTCGAGGA TACTGAACTG GCATCTTCAC TTGGATGCCC TGGATGTCCC TTATCCACAA GGGTGGGCGA TCCAAAAGAA TCTCCAAGCT CTCATAACTA TGAAATAGTT TGAAGATAGT TTTGACTGG |
| Length | 1229 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 11472778.. 11474635 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G27600.1 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| TAIR curator summary | Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9. |
| Alias | [I9H][IRX9-L][IRREGULAR XYLEM 9 Homolog][IRREGULAR XYLEM 9-LIKE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.19615 |
Ahg495042 | exocyst complex component 84B |
| 5.74456 |
Ahg938705 | INO80 ortholog |
| 10.6771 |
Ahg893360 | Protein of unknown function (DUF1421) |
| 14.1421 |
Ahg322444 | |
| 15.1658 |
Ahg485258 | RNA polymerase III subunit RPC82 family protein |
| 17.2337 |
Ahg920672 | Homeodomain-like/winged-helix DNA-binding family protein |
| 25.4951 |
Ahg484055 | NHL domain-containing protein |
| 32.311 |
Ahg926115 | Chaperone DnaJ-domain superfamily protein |
| 36.0832 |
Ahg482474 | Exostosin family protein |
| 38.1838 |
Ahg316204 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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