Detail



ID : Ahg921810

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921810|scaffold_103091.1
Sequence
GTTTGACACC TTTCGGAAAA ATGGAAGATG TAAACGGTTC CGATCGATTC TCCTTCGAGA TCAAACAGCC CTACGTTGAA GAACGGTTGG ATAACAACAA GAAACGGGAA GAGGTAGCTG TAGATGCGGT GAGTTTCGTG GCGGAGACTG AAAATGGGAA GGAGGAGGTC AATTTTGTGC CGAAGAAGCT TATAATTGTT GTCACACCAA CGTATAATCG AGCGATGCAG GCGTATTACT TGAACAGGAT TGCTCAAACG CTGAGACTTG TTGAGTCGCC TGTGCTGAAG AATATTATTA CGAAAAAAGG ACAATTGTTC CCGAAAGGAT ATCCGTATCC GTATTATCCG TGATTTTAGT ATCCGTATCC GTAT 
Length374
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11517846.. 11518259
Download Sequence
A.thaliana
AGI-codeAT1G27600.1
DescriptionNucleotide-diphospho-sugar transferases superfamily protein
TAIR curator summaryEncodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9.
Alias[I9H][IRX9-L][IRREGULAR XYLEM 9 Homolog][IRREGULAR XYLEM 9-LIKE]
Gene coexpression
MR
MR Locus Description
10.4403 Virus1606
11.8743 Virus3267
42.5911 Ahg474855 F-box/RNI-like superfamily protein
58.1722 Ahg948096
59.0424 Virus1808
61.2617 Ahg930046
73.1779 Ahg932389
76.7854 Ahg948644
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression