Detail



ID : Ahg922113

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|922113|scaffold_103394.1
Sequence
GAGAGTTTTT TTTTTATCTG ATGGGTTTTG AATTTTCTAT TCAGGCTGGT GCTGTCTCAG TTTCAATTGG AAACGAACGT TCTCTTAGAA GACCTGCCTT CAAGAACAAT AGCATAAGCT TCAAGGGCAA GTCTTGGTCA TCTTCCTTGG CACTGAACCA GAAGACAACA GGCATAAGAG ATGCAAAACG GTACACCAAC ACGACAATAT GCATGTCGGT TCAACAGACA AGTAGTTCCA AGGTTACTGT CTCTCCTATA GACTTGGAAG ACGCTAAGGA TCCTCCTTTG AACTTGTACA AACCCAAGGA GTCCTACACG GCTAAGATTG TCTCCGTGGA GCGAGTTGTT GGCCCAAAAG CCCCTGGAGA AACTTGTCAT ATCGTAATCG ATCATGATGG TAACCTTCCT TACTGGGAAG GGCAGAGTTA CGGTGTTATT CCTCCCGGTG AGAACCCGAA GAAACCGGGA GCTCCACACA ATGTGCGCCT TTACTCGATT GCATCAACAA GGTACGGAGA TTTCTTTGAC GGTAAAACAG CGAGTTTGTG TGTACGTAGA GCTGTTTATT ACGATCCCGA GACTGGAAAA GAAGATCCTT CAAAGAACGG AGTCTGCAGC AACTTCTTAT GTGATTCAAA GCCCGGAGAC AAGATTCAAA TCACTGGTCC ATCTGGGAAG GTAATGCTAT TACCCGAGAC TGATCCAAAC GCGACACACA TAATGATAGC CACGGGAACA GGAGTGGCTC CTTACAGAGG CTACCTACGT CGAATGTTCA TGGAAAACGT CCCAAACAAG ACATTTAGCG GCTTAGCTTG GCTCTTCTTA GGCGTGGCCA ACACCGATAG CCTTCTCTAT GACGATGAGT TTACCAAGTA CTTAAAAGAC CATCCAGAGA ACTTTAGGTT CGACAAGGCA TTGAGCAGGG AGGAGAAGAA CAAGAAAGGT GGAAAGATGT ATGTGCAGGA CAAGATTGAG GAGTATAGTG ATGAGATCTT CAAGCTATTG GACAATGGAG CTCATATTTA CTTCTGTGGG CTTAAAGGAA TGATGCCTGG GATTCAGGAT ACACTTAAGA GAGTTGCAGA GGAGAGAGGT GAGAGCTGGG ACTCGAAGCT TTCTCAGCTT AGGAAGAACA AGCAGTGGCA CGTTGAAGTC TATTGAGCTC TTTATTTGTT TTTGCTG 
Length1187
Protein Sequence
Protein Residue
Map Locationscaffold_1: 13015440.. 13017002
Download Sequence
A.thaliana
AGI-codeAT1G30510.2
Descriptionroot FNR 2
TAIR curator summaryEncodes a root-type ferredoxin:NADP(H) oxidoreductase.
Alias[ATRFNR2][RFNR2][root FNR 2]
Gene coexpression
MR
MR Locus Description
7.28011 Ahg493893 urophorphyrin methylase 1
15.5885 Ahg940784 NAC domain containing protein 83
29.3939 Ahg475314 NAD(P)-linked oxidoreductase superfamily protein
34.5832 Ahg315746 Ran BP2/NZF zinc finger-like superfamily protein
35 Ahg924105 Sec14p-like phosphatidylinositol transfer family protein
38.5357 Ahg942208 alfin-like 4
44.4297 Ahg349310 Putative endonuclease or glycosyl hydrolase
45.8912 Ahg476263 Cytidine/deoxycytidylate deaminase family protein
48.5798 Ahg477806 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein
50.7937 Ahg890926 alpha/beta-Hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression