Detail



ID : Ahg922901

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|922901|scaffold_104182.1
Sequence
AAAGAAAATA CAAACTCAGC CATGGCAATT ACAAAAGCTC ACTACTCTTT AGCAGTTCTT GTCGTTCTCT TTGTCGTTTC GAGTAGCCAA AAAGTCTGCA ATCCAGAATG CAAGGCCAAA GAACCCTTCC ACTGCGACAA TACTCATGCA TTCAACCGAA CTGGATTTCC CAAAAATTTC ACTTTTGGTG CAGCTACTTC GGCATATCAA ATTGAAGGTG CAGCACATAG AGCACTTAAT GGATGGGACT ACTTCACTCA TAGATATCCA GAAAAAGTAC CGGATCGCAG TTCAGGAGAC CTTGCTTGTG ATTCGTATGA TCTTTATAAG GATGATGTCA AACTACTAAA AAGAATGAAT GTTCAAGCAT ACCGACTCTC GATAGCATGG TCAAGGGTCT TACCAAAGGG AAGACTGATT GGGGGAGTGG ACGAGAATGG GATAACATAC TACAACAATC TCATTAACGA GTTGAAAGCA AATAGCATAG AACCATATGT GACTATTTTT CATTGGGATG TTCCCCAGAC TTTAGAAGAC GAATATGGAG GCTTCTTAAG CCCACGTATA GTGGAGGATT ACACAAACTA CGCTGAGCTT CTATTCCAAA GGTTCGGAGA CAGGGTCAAA TTTTGGATCA CTTTAAATCA GCCTTTCTCT CTTGCAACCA AAGGTTATGG AGATGGATCG TATCCACCAG GACGGTGCAC CGGCTGTGAA TTTGGAGGAG ATTCTGGAGT TGAACCTTAT ACAGTTGCAC ATTACCAACT TCTAGCTCAT GCGAAAGCTG TATCTCTATA CAGAAAAAGA TATCAGAAAT TCCAAGGTGG TAAGATAGGA ACAACCTTGA TCGGGAGATG GTTCGCCCCG CTAAACGAAT TTAGCGAACT CGACAAAGCT GCTGCAAAAC GAGCATTTGA TTTTTTTGTT GGATGGTTCT TGGATCCATT GGTGTACGGA AAATATCCAA AGATAATGAG AGAGATGGTA GGAGATAGAT TGCCAGAATT CACACCTGAG GAATCAGCTT TAGTTAAAGG ATCACTTGAT TTTCTAGGGT TGAACTATTA CGTTACACAA TATGCAACCG ACGCACCTGC TCCGACACAA CCTAGTGCAA TAACCGATCC ACGAGTTACT CTTGGATTTT ACCGCAATGG AGTTCCTATT GGTGTTGTGG CTCCTAGCTT CGTCTACTAT CCTCCAGGAT TCCGTCAGAT TCTAAACTAC ATCAAAGACA ACTACAAAAA TCCACTTACC TACATCACCG AAAACGGAGT TGCTGATCTT GATCTTGGAA ACGTAACGCT TGCAACTGCT CTTGCCGATA ATGGACGAAT TCAAAACCAT TGCAGCCATC TCTCTTGTCT CAAATGCGCC ATGAAGGATG GATGCAACGT AGCAGGATAT TTTGCATGGT CATTGATGGA CAATTACGAA TTCGGAAATG GTTACACTCT CCGGTTTGGT ATGAATTGGG TCAACTTCAC TAATCCTTCT GATCGAAAAG AAAAAGCTTC TGGAAAATGG TTCTCTAGGT TCCTCGCAAA ATAAGTGGAA AATGGAAAAT GGTT 
Length1574
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25855466.. 25858276
Download Sequence
A.thaliana
AGI-codeAT1G47600.1
Descriptionbeta glucosidase 34
TAIR curator summaryEncodes a myrosinase. Over-expression led to a glucosinolate profile change.
Alias[BGLU34][TGG4][beta glucosidase 34][THIOGLUCOSIDE GLUCOHYDROLASE 4]
Gene coexpression
MR
MR Locus Description
22.891 Ahg896275
38.6523 Ahg932542 RNI-like superfamily protein
38.7298 Ahg493441
41.1825 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
51.4781 Ahg899041 lysyl-tRNA synthetase 1
59.6322 Ahg316947 Pectin lyase-like superfamily protein
60.7371 Ahg334440 Pentatricopeptide repeat (PPR) superfamily protein
63.6396 Ahg484096 RING/FYVE/PHD zinc finger superfamily protein
69.6707 Ahg950373
69.685 Ahg319046 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression