Detail



ID : Ahg923056

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923056|scaffold_104337.1
Sequence
TTTCTTGAGT CTTTGCACTG ATGACGACGG CGGAAACTGG ACAATCCTCT GTTCCTCTCG ACACCAAATT CTCAGACATC GAGATTAAAT GCGATGATAT GGTAATATGC CCTGAGATTA AACCATCAAT AACAAAGAAT TTGGGTCAAG GTTCTGCTAC TATACATAAC AAGAGTTCGG ATGCCATACT TGTTGACGAG GCTGTTGTCC TGAAAGATAG TGCTGTTGAT ATCATGAGTG GATCTGAAAT TGTTCCTGTC CCTGGAGGAG AAGAAACTCG AAACAAGTTA GAGATGCAGT CTGTAAACAA TAAAGCTCTC ATTGAGGAAC TTGATGAAGT TATTGAGAGT CTGTGTGTGC CTTCTGAGTA TGCAGCATCC CTAACAGGAG GCTCATTTGA TGAAGCAGAC ATGCTCCAGA ATATTGATGC TTGCGAGTGG TTAGCCAAAG TAAAAGAGAA ACGAGCAGAA CTAGATACAT TAAAAGCTAC TTTTGTAAGG AGAGCTTCAG AGTTCTTGAG AAACTACTTT GTTAGTCTGG TAGATTTCAT TGTTATCGAC AAAAGCTACT TTTCTCAGAG AGGGCAGCTG AAGAGGCCTG ACCATGCAGA TTTGCGGTAC AAATGGAGAA CATATGCTCG TCTTTTGCAA CATTTAAAGG GTCTTGATAA GAATTGTTTG GGTCCATTGA GAAAAGCATA CTGCAGCTCA ATGAACTTGC TCCTTCGTCG GGAGGCTCGT GAGTTCACGA ATGAGCTTCG TGCAAGCACA AAAGTATCCC AAAATCCCAC TGTCTGGCTA GAAGAATCTA CGGGCTCTAA TCAGAATGCA AACACTGACA CCTCTGCAGT GGCAGATGCT TATGCCAAAA TGCTAACAAC ATTCATCCCT CTTCTTGTAG ATGAGAGTTC TTTTCTTGCG CACTTCATGT GCTTTGAGGT ACCGGCTCTT ACTCCTCCTG GAGGTGCTGC TAGTTATAAC AAAAACCGGT CCAACAATGA TGATTTGGGT ACCATGGACA AGAAAACTGG TCAAAACTCC CTGGACCTGA AGGCATTGAA TGAATCTATT CAAGATTTAC TTGATAGTAT TCAAGAGGAG TTCTTTGTTG TTATTGACTG GGCATATAAA ATAGATCCTC TACTGTGTAT ATCAATGCAT GGTATAACTG AACGTCAGAA AGCCGATACT TCAGGATTTG TTCGCCTTTT GCTTGGAGAT CTGGAGTCGA GAGTTTCTAT GCAATTCAGC CATATGGGTG TCTTGCCTTA TATTCCAAGA TTTGCAGCAG TTGCTACTCG TATGGAACAG TACATACAAG GGCAATCTAG AGATTTGGTT GATCAGGCAT ACACGAAATA TGTAAGCATA ATGTTCGTGA CCCTCGAGAA GATTGCCCAG CAAGATCCTA AATATGCAGA TATTCTCCTT TTAGAAAACT ATGCTGCTTT CCAAAATAGC TTTTATGAAC TGGCTGATGT TGTACCCACA TTAGCCAAGT TCTATCATCA GGCAAGTGAA GCATATGAAC AAGCTTGTAC GCGCCGCATT AGCATGATAA TTTACTACCA ATTCGAAAAA CTTTTCCAAT TTTCTAAAAA AATTGAGGAT TTCATGTATA CTATCACCCC TGAAGAGATA CCATTCCAGC GTGGTTTGTC GAAAAAGGAA CTCCGAAAGA TGTTAAAATC AACCCTGTCA GGGGCGGACA AATCGATTGC AGCAATGTAT AAACAGTTGC AGAAGAATTT AACATTGGTG GAGTTGCTAC CACCGTTGTG GGATAAATGC AAGAAGGAAT TTCTGGACAA GTACGAGAGC TTCGTGGAAC TTGTAGCCAA AGTTTACCCG AATGAGAACG TTCCTGGGGT TACTGAAATG AGGGGACTTT TGGCTTCCAT GTAAAAAAAA CAAGTGATAG AACC 
Length1924
Protein Sequence
Protein Residue
Map Locationscaffold_1: 22792529.. 22796984
Download Sequence
A.thaliana
AGI-codeAT1G47550.2
Descriptionexocyst complex component sec3A
TAIR curator summaryEncodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.
Alias[SEC3A][exocyst complex component sec3A]
Gene coexpression
MR
MR Locus Description
47.655 Ahg937443 F-box and associated interaction domains-containing protein
73.7699 Ahg946970
88.9494 Ahg911862 Protein of unknown function (DUF833)
95.9375 Ahg901700
96.1561 Ahg343076
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression