Detail


ID : Ahg923607

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923607|scaffold_104888.1
Sequence
TTCTCTGTTG GTGTGTCTCA TACATGACAA TCCCTGCTGC TCTTGTCTTT ATCCCTGTTG GCATCCTCTT CTTGGTCTCA GGGCTCATCG TCAACAGCAT TCAGCTTGTG TTCTTCATCA TTGTTCGTCC ATTCTCAAGA AGTTTGTATA GAAGAATCAA CAAAAATGTT GCGGAATTAC TTTGGTTGCA GCTCATATGG TTGTCTGATT GGTGGGCTTG TATAAAGATC AATTTATACG CTGATGCAGA GACTCTAGAG TTAATTGGGA AAGAACATGC ACTTGTCTTA AGCAATCATC GAAGTGACAT TGATTGGCTT ATTGGATGGG TCATGGCTCA GCGTGCAGGT TGTCTTGGAA GCTCTTTAGC CATCATGGCA AAAGAAGCCA AGTATCTTCC AATCATAGGT TGGTCGATGT GGTTTTCGGA TTACATTTTC TTGGAAAGAA GTTGGGCTAA AGATGAGAAT ACCCTCAAGG CAGGTTTTAA ACGACTTGAG GACTTTCCTA TGACATTTTG GCTAGCTCTT TTCGTTGAAG GAACTCGTTT CACTCAAGAG AAGCTTGAAG CTGCTCAAGA TTACGCCTCT ATCAGAAGCT TACCATCACC TCGAAATGTT CTGATTCCTC GTACAAAGGG ATTTGTTTCA GCGGTATCTC AAATACGGTC ATTTGTTCCT GCAATTTATG ACTGCACCTT TACCGTTCAT AACAATCAGC CTACACCAAC TCTGCTTAGG ATGTTCAGTC GACAATCATC TGAGGTAAAT TTGCAGATGA GACGTCACAA AATGAGCGAG TTGCCAGAAA CCGATGATGG CATTGCACAA TGGTGCCAAG ATCTATTTAT CACCAAGGAT GCTCAACTTG AGAAATACTT CACAAAAAAC GTATTTAGCG ACTTGGACGT TCACCAAATC AACCGGCCAA TCAAACCATT GATCGTGGTC ATCATTTGGT TGTGTCTTCT TATATACGGT GGTTTTAAGC TATTCCAATG GCTTTCCTTA GTGGCCTCGT GGAAGATCAT TCTTTTGTTT GTGTTCTTCT TGGTGATTGC AACTATAACA ATGCAAGTAC TTGTTCAAAC GTCTGAGTCA CAACGTTTCA CTCCTGCCAA GAGACCTTTA GAAGAACAGC TTATTTCTCT CCCCGAATGT TTCGCGGAGG TGTCTTTGAC GCACCACGAT CTCGCTTGTG ACATGTTGCG TTTTAACTTC TGTCATCCTA TGGATTTATC CCCTATGTTT CATACTTTCT CAATCTTTCT AGCTACCTAT GTTGTCCGAC ATGGGCCTAG CTTCTACAGC TGCAGTTTTG AAATGGAAGC AGACGGAGAT GTTCCAGTTG CTGCAGGACA GTTTGCAGCG GGAACCACTT GCATTGGTTC AGGCGCAATT CTGTTGAGGC TGATTCAGGA GAATCCAGTG CAGAAGAAAA GCTGGTTAAT GCATGAGAGA CCCACTGCAA GGAATGGTGC AGTACTCTGT TACCACTACG AGCATCAGGA TTTGATGGGA ATGTTGTATT ATATATGAGG TATACTGTTA AAAATAAT
Length1558
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25752139.. 25757208
Download Sequence
A.thaliana
AGI-codeAT1G51260.1
Descriptionlysophosphatidyl acyltransferase 3
TAIR curator summaryACYL-COA:1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, PUTATIVE SIMILAR TO ACYL-COA:1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE GI:4583544 FROM [BRASSICA NAPUS]
Alias[LPAT3][lysophosphatidyl acyltransferase 3]
Gene coexpression
MR
MR Locus Description
9.64365 Ahg934445
16.8819 Ahg896941 tubby like protein 10
18.4391 Ahg487975 RNA-binding (RRM/RBD/RNP motifs) family protein
26.6458 Ahg495365 SNARE-like superfamily protein
26.9258 Ahg337983 Copper transport protein family
29.5635 Ahg907586
39.2428 Ahg313100
53.8331 Ahg355996
57.3149 Ahg901120 isopropyl malate isomerase large subunit 1
61.7252 Ahg891068 myb domain protein 79
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression