Detail



ID : Ahg923843

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923843|scaffold_105124.1
Sequence
TCTTCTTCTT GTTTCTTCAC AATGCTCACT TCTAATTCTA AAGACAAGGA AAGGTCTCTC TCCTTCTTAT GTTGCTGGTA CTTAGGTCGT CGACGAGTTG CTATGCTGCT CCTTCTTAGC CTTGCATTTG TTGTCTTTGT CTTGGGTTCT TACACTATCA ACAAAGAGAG CAATAGTCCA AACATTCATC AGAGTATTGA GACGATGGAT TTTGGAAGCA ACCAAACACC GATAAGTAGA GAATTGACTT CTTTCTATAC ACAGAACTCT GATAATGATC ATATTAGAGA TTCTTTTAAG TGGAATGGCA TTGGAGGAAG TGATGTAGAC GTCAACCATC CTTCTCCATC GCATCACCAT CCGTGTGATA GTTTTTCATT TCCTCCTCCT CCACCACCTG AAATGAGAAG GCCTGGTCCA CGCCCGTGTC CGGTATGCTA TCTACCTCCA GAAGAGGCCT CAGCGCATAT GCCAAAGTAT CGATTTGAAT CTCCCGTGCT CAAGAATCTG ACATATATCC ATGAAGAGAG TCCTGTAAAA CCTGAAGAAA GTCAAGGAGG CTCTGACTTC GGAGGTTATC CTTCTCTTGA GCATAGGGCT AACTCCTTTG ACATAAAAGA GTCCATGACA GTGCATTGCG GATTTATTAA AGGAACAAAA CCGGGTCACC AAACTGGATT TGACATTGAT GAGGATATCC TTCATGAGTT GGACCAGTCC CATGATGTGA TTGTCGCGTC AGCGATATTT GGAAAGTATG ACATAATTCA AGAACCAGTG AACATCAGTG AAATGGCGAG GAAGAACATC CCATTCTACA TGTTTGTTGA TGAAGAAACA CATTTATACC TTAAGAACAC GTCGAGTTAT ACAGACGATA ACAAGAGAGT AGGATTGTGG AGGATCATTG TTGTACATAG TGTCCCTTAT ACAGATGCAC GGCGTAATGG AAAGGTTCCG AAGCTTCTAT TGCATAGATT ATTCCCAAAT GTCCGGTACT CTATATGGGT TGATGCAAAG CTCCAGCTTG TTGTAGATCC ATATCAAATC CTTGAGAGGT TCTTGTGGAG AACGAATTCT AGTTTCGCAA TCTCGAGACA TTACCGACGT TTTGATGTGT TTGTAGAGGC TGAGGCGAAT AAGGCTGCAA GAAAGTACGA CAATGCCTCA ATTGATTACC AGGTAGAGTT CTACAAGAAG GAAGGTTTAA CACCTTATAC CGAGGCTAAG CTTCCAATAA CTAGTGATGT TCCTGAAGGT TGTACCATCA TAAGAGAACA CATACCGATC ACAAACCTTT TCACGTGTGT TTGGTTCAAC GAGGTAGACC GGTTTACTTC CAGAGATCAG CTAAGCTTTG CAATTGCAAG AGACAAGATA AGAGAGAAAG TTGATTGGAA CATCAATATG TTCTTAGACT GTGAAAGACG CAACTTTGTG AAACAGGTAT ATCATAGAGA CATTTTGATG AACATGAAAC CTCCTCGAGC TTCTTCTAGG ATTTTTCTCG AGCCACCGGC TTTGCCACGT GGAAGATTAG TTGGTGGTAG AGCCACAACG GGGAAGAAGA CTCCGGGACA ACGTGGAAAA AGGCGTCACC GGAAAGTTTC AGCCGGTGGA AGAAACATGA GATAGAGAGA GAGCTTCTAC ACATCTTC 
Length1658
Protein Sequence
Protein Residue
Map Locationscaffold_1: 26882113.. 26884473
Download Sequence
A.thaliana
AGI-codeAT1G53040.1
DescriptionProtein of unknown function (DUF616)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.748 Ahg936082 expansin A15
34.5977 Ahg925289 O-Glycosyl hydrolases family 17 protein
40.7922 Ahg485694 Pectin lyase-like superfamily protein
41.8927 Ahg486580 Putative endonuclease or glycosyl hydrolase
42.1189 Ahg487523 Eukaryotic aspartyl protease family protein
45.5961 Ahg930445 topoisomerase II
51.4393 Ahg491350 Vacuolar import/degradation, Vid27-related protein
51.9615 Ahg928877 alpha/beta-Hydrolases superfamily protein
53.6749 Ahg478831
56.7715 Ahg493476 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression