Detail



ID : Ahg924077

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924077|scaffold_105358.1
Sequence
ATTTTGGATT AAACTCAAAT ATGAACTCTT TAGTTCATTA TAGCACAAGT GTTGTAGTTC GTAAAGCTTC TCGCTTTCTC TTCACATCGA GGAGATTTTG CAATGGTAGC ATCGGTGGTG ATGTAACCGA TAATGGGACC GAAGAGCCCT TGAAGATTTC CTGGGAATCT TCTGAGATGG ATTGTGGGTT TGACGAGGAG GAACATGGTG AGAAAATCTC TGTTAGAAGA AGGTTTATGG AGAGTGCTAA GCTCGGTGCG TCTCGGGTTC TCGATACTTT ACAGCAAGAT TGTCCCGGTT TCAATACGAA ATCAGCTTTA GATGATTTGA ACGTTACAAT CTCAGGGCTA TTAGTGAGAG AGGTTCTTGT TGGGATCTTA AGGACACTGA GCTATGATAA TAAGACAAGG TGTGCTAAGC TAGCTTACAA GTTCTTTGTG TGGTGTGGTG GACAAGAGAA TTTCAGGCAC ACTGCGAATT GTTATCATTT ACTTATGAAG ATATTTGCAG AGTGTGGTGA GTATAAAGCC ATGTGCAGGC TAATTGACGA GATGATCAAA GACGGTTATC CAACGACGGC ATGCACGTTT AATCTGTTGA TATGTACTTG CGGTGAAGCA GGCCTTGCTA GAGATGTCGT GGAGCAATTC ATCAAGTCGA AAACTTTCAA TTACCGACCT TACAAACACT CTTATAACGC CATTTTGCAT TCTTTGCTAG GGGTGAAACA GTACAAGCTG ATTGATTGGG TTTACGAGCA GATGTTAGAA GACGGGTTTT CGCCGGATGT TCTGACTTAC AACATTGTAA TGTTTGCAAA CTTTAGGTTA GGGAAAACAG ATCGGCTTTA CAGATTACTC GATGAAATGG TTAAAGACGG GTTTTCTCCT GATTTATATA CATACAACAT CCTCCTCCAC CATCTAGCAA CAGGAAACAA GCCTCTCGCT GCTCTTAACC TACTAACTCA TATGAGGGAA GTTGGAGTAG AGCCCGGTGT GATCCATTTC ACTACTCTGA TAGACGGGCT GAGCCGAGCT GGGAAGTTAG AAGCTTGCAA ATACTTTATG GACGAAATGG TGAAAGTTGG ATGCAAGCCG GATGTTGTTT GCTACACTGT TATGATCACA GGTTATATAT CAGGTGGGGA GCTCGAGAAA GCTGAAGAAA TGTTTAAAGA GATGACAGAA AAGGGTCAAC TCCCTAATGT TTTCACATAC AACTCGATGA TCCGCGGGTT TTGTATGGCG GGGAAATTCA AAGAGGCGTG CTCGTTGCTC AAGGAAATGG AGTCAAGAGG GTGTAACCCT AATTTCGTGG TGTATAGTAT ACTGGTGAAC AATCTAAGAA ACGCAGGGAA GGTTTTAGAG GCTCACGAGG TAGTAAAAGA CATGGTGGAG AAAGGGCATT ATGTTCATCT TATTTCAAAG TTGAAAAAAT ATAGAAGATC TTAGTTTTTG TTTCAAAAGG CAATTTT 
Length1477
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27959246.. 27960715
Download Sequence
A.thaliana
AGI-codeAT1G55630.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.3441 Ahg489556 Protein of unknown function (DUF1624)
30.5941 Ahg482255 F-box family protein
35.4965 Ahg895621
36.0555 Ahg923242 Signal recognition particle, SRP54 subunit protein
36.0555 Ahg923241 Signal recognition particle, SRP54 subunit protein
38.0526 Ahg478704 RNA-binding (RRM/RBD/RNP motifs) family protein
45.9891 Ahg471537 F-box/RNI-like/FBD-like domains-containing protein
47.7284 Ahg928205 germin-like protein 8
48.0625 Ahg494602 translocase of outer membrane 22-V
53.2071 Ahg472157 Methyltransferase MT-A70 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression