Detail



ID : Ahg924139

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924139|scaffold_105420.1
Sequence
ATTGTCTTGC GTTTTTGGAT ATGGAAACTG TGGAAAACTC CTATGTAGCT CGTATATGCG TAGAGCTTTT TCATGAGCTT CCCCATCTTC CATCAGATGA ATCTCAGTGC GAAATTACAA CTCTTGAGAG ACGGTTTTTG CGTAATTGCC TAGTAGAGCT TGAAAACTCA TCCCCCAAAA CAGAACCACT GACACATGTT TATGTTGATG AATCAAACTA TTGGAGATTC ATCAAAACAG TTAGGGTTTT GGCTGAAGTT TTCAAGGATA AGAAGATCAC TGAAACAACA CGGAAAAGTT TAATTCAGGC TATAGAGTTG GAGAATAAGT ACAATGACGA AGTCGAAGTC AAGCTTAGGG AAGGAGAAGA TGCACTTTCT AGAACAAAGG AAGAAGTAGA GATGATGGAA CAGTTACTTG AGTCTTACAA GGAAGAACAA GGTAAATTGC AACTTCAAGT TAAAGCCTTG GAGCACAAAC ATGAAGCAGA GTTGCAGCGT AGGACAGAAA CTGAAATCGC GTTAGCCATA GAACGTGATT ATATGCGTTG GAAGGCTGAG TATTTCGAGA GCGAATACAA CGAAGAACTG GCACGCAGGA GAGAAGACGT GAAAGCGTTG GAGGGGTTAA AGCAACTGCA TGAAACTGTA ATAATAGAAA AAAAGAACCT GAATTCACAG GTGATAACAT GGCAAGACAA GTACGACCAA GAGTCAATTA TTAGAAAAAA AACAGAGGAT TCGCTTTCTA CTAAAATACT AGCGCTCAAG ATTGTCAAAG GAATTGTCGA ATCGTACAAA CAAGAAACAG ATGCAATGCG ACAAGAGAAG GACAATGCTC TTAAAACAGC ACAAGAGACA GTGCGCCTTC GTCAGCCTCC ATCATCATTT TTCTGCCCTA TAACACAGGA TGTCATGGAA GATCCACACA TGGCTGCCGA TGGATTCACA TACGAATTAG AAGCTATTAA GAAATGGATT AGCACAGGTC ACAAGACGTC GCCGATGACA AATCTCAAAC TGTCACATCT CAACCTTGTC CCTAACCGTG CTCTCTACTC TGCGATTCAG GAGTTGCTTT GATTCTTCTT GTTTAGCTAA CTG 
Length1103
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28186831.. 28188215
Download Sequence
A.thaliana
AGI-codeAT1G56030.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.31662 Ahg887813
8.12404 Ahg947079
9.05539 Ahg341908
10.583 Ahg487738 Pectin lyase-like superfamily protein
12.0416 Ahg949394 F-box family protein
13.6748 Ahg891289
14.1421 Ahg333309 F-box family protein
22.8473 Ahg923548
25.6905 Ahg492333 Uncharacterised protein family (UPF0497)
26.2298 Ahg930762
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression