Detail



ID : Ahg924517

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924517|scaffold_200078.1
Sequence
ATACACCGTT GACCACTTCA ATGGCTTCGC GCTCGTCTTC TTCTTCTTCT TCACCACACA AAGCCTATAA CAATTTCACC CGCCTCGATG CTCAATCCGC CGCCAAGAAA GCCGTCTCAG TGATCGGATT AGGTTACTAT CTCTGCTCCG ATGTTTGTTT CTCCGCTTGT AAAACTACAC CAGACGGTTC CAGGTTAGTC GAAATCGTCC CGACCCGGAA CCGTGACTTA GTCTTCCCCG GTGGGATCGT CGTTAACAAC GTCTCGAGCT CGATTAAGTG CGATAAAGGC GAACGTACTC GATTACGCTC CGATATACTC TCTTTTAATC AGATGTCGGA GAAGTTTAAT CAAGATATGT GTCTCTCCGG GAAGATTCCG TCGGGGATGT TTAATAATAT GTTTGCGTTT AGTAAATGTT GGCCTAAAGA TGCGAGCTCT GTGAAGAATT TAGCTTATTG GTTCATTAGC TTGTATATAC GTGTTGAGAT TGTTAGGAAG CAATTGACTC TACGTGATGA AGTGAAACGT GAGGTTCCTT CTTCTTGGTA CTCATGTAGT TGTTGGAGTG AGTACTAAAT TTTAAATTTA GTTGTTCCG 
Length599
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3023604.. 3024342
Download Sequence
A.thaliana
AGI-codeAT1G28380.1
DescriptionMAC/Perforin domain-containing protein
TAIR curator summaryThis gene is predicted to encode a protein involved in negatively regulating salicylic acid-related defense responses and cell death programs. nsl1 mutants develop necrotic lesions spontaneously and show other features of a defense response, such as higher levels of SA and disease resistance-related transcripts, in the absence of a biotic stimulus. The NSL1 protein is predicted to have a MACPF domain, found in proteins that form a transmembrane pore in mammalian immune responses. NSL1 transcript levels do not appear to change in response to biotic stresses, but are elevated by cycloheximide in seedlings, and by sodium chloride in roots.
Alias[NSL1][necrotic spotted lesions 1]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg895431 Concanavalin A-like lectin protein kinase family protein
2.44949 Ahg896700 Concanavalin A-like lectin protein kinase family protein
9.59166 Ahg919505 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
25.1396 Virus0411
25.1396 Virus0931
25.1396 Virus2146
25.1396 Ahg906174
32.8634 Virus1626
35.6651 Ahg346774
37.8286 Virus2045
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression