Detail



ID : Ahg924690

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924690|scaffold_200251.1
Sequence
CCCTCAAGAA AACAGAGTAA AAATGGATCA AAATTTGTAT CGCAAGTGCT TGGTTATTTT ATCAATGATG GCACTGATCG GCACATCAAT GGCGGCATAT GCGGGGACCC CATGGCGTAC GGCCTCAGCC ACTTTTTACG GTGATGAGAC CGGCAGCGCA ACTATGGGTG GGGCTTGTGG CTATGGTAAC ATGTGGGACA GCGGCTACGG CGTAGCCACG ACTGCTCTGA GCACAGCTCT GTTCAACGAC GGTTATGCAT GCGGTCAATG TTTCCAGATA AGGTGTGTGT CATCGCCTAA CTGCTACTAC GGTTCACCAG CCACCGTGGT GACTGCCACC AACATATGTC CACCAAATTA TGGCCAAGCT TCCAACAATG GTGGATGGTG TAATCCACCA CAAGTCCATT TTGATTTGGC TAAACCAGCT TTCATGAAGA TCGCTAATTG GAAGGCTGGT ATCATCCCCC TCTCATACCG CAGAGTGGCA TGTAAGAGAA CCGGAGGAAT AAGGTTTAAA TTTGAAGGAA ATGGGTATTG GCTACTTGTG TACGTGATGA ACGTAGGTGG TGCAGGTGAC ATCAAGACCA TGGCCGTGAA AGGTAGCCGC ACAGGCTGGA TCAACATGAG CCATAATTGG GGAGCTTCGT ACCAAGCCTT TTCTTCTCTC TACGGTCAGT CTCTCTCGTT CCGGCTCACC TCTTACACCA CTCGTCAGAC CATTTACGCT TATAATGCTG CTCCGGCTAG CTGGAGCGCC GGCAAGACCT ACCAGAGCAA GGCTAATTTT AGCTGATTTA GGTCATATTC AATTCCGAA 
Length819
Protein Sequence
Protein Residue
Map Locationscaffold_2: 1224647.. 1225973
Download Sequence
A.thaliana
AGI-codeAT1G62980.1
Descriptionexpansin A18
TAIR curator summaryAlpha-expansin 18. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXP18][ATEXPA18][ATHEXP ALPHA 1.25][EXP18][EXPA18][expansin A18][EXPANSIN 18]
Gene coexpression
MR
MR Locus Description
22.2261 Ahg894086
24.96 Ahg900451
40.8901 Ahg486927 cation exchanger 4
46.4112 Ahg943324 RNI-like superfamily protein
47.244 Ahg484914 transposable element gene
53.6656 Ahg481945 LOB domain-containing protein 13
56.3915 Ahg931789
59.0424 Ahg344288
72.5121 Ahg338955 Clathrin, heavy chain
72.7393 Ahg924251
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression