Detail



ID : Ahg924765

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924765|scaffold_200326.1
Sequence
TGGAGAATCC TAATAAGGAT TTAATGGAAA CTAATCCAAG AAAAATACGG TCATATTGTT ACATATGGTT GATAGTATGC ATATTTGTAT TGATTGTTTG TTCAATATTG TCCAGAGCAG AAGAAAAAGA AGGAAAAAAC GAAAACGATG ATCATATACC AAAGATTTAC TCTGTTTTGG TTGAAGGTGA ACCATTGGCC TTTCGTGCTT CTACTAACAT CAACAGCAAA GCTATGGCAT ATGAAGCAAA GAAGATAGTA GAGATTCATG ACGAAATACT TGGAAGCACA CTTGAAAATG GAAGTTATAC AAAGCTTTAT AGCTTCAAAC ATGTCATCAA TGCTTTTGCA GTCCGTACCA CTGCTTCTCA GGCCAAGAAA CTAAAGAAAA CAAAAGGAGT GAAGGCAGTA GAAGAAGACA AAGGAGTGAA ACTAATGACA ACTTACACTC CCGATTTCTT GGAACTTCCT AAACAAGTCT GGCCTAAGAT CTCCAGTGAA GGTGGCAGAC GCGCAGGAGA AGATATCGTA ATCGGTTTTG TGGACACTGG AATTAACCCT ACTCATCCGA GCTTCGCCGC ACTCGATCTC ACAAACCCTT ACTCATCAAA TCTCTCACGT TTGAAATTCT CCGGCGACTG TGAGACCGGT CCTCTCTTCC CCGCTGGATC TTGTAACGGA AAAATCATAT CCGCTAGGTT CTTTTCCGCC GGAGCTCGAG CTTCCGTGGC TCTCAACTCC TCATTGGATA TACTCTCTCC GTTCGATGCC TCCGGCCACG GAAGCCACGT GGCATCTATC GCAGCCGGCA ACGCTGGTGT TCCAGTGATC GTCGACGGAT TCTTCTACGG ACAAGCCAGC GGTATGGCCC CACGTGCACG AATAGCCGTT TACAAGGCGA TTTATCCATC AATCGGAACT CTTGTTGACG TAATTGCAGC CATCGACCAA GCAATTATGG ACGGCGTAGA TGTATTGACA CTATCGGTGG GACCGGACGA ACCACCGGTG GATAAACCGA CGGTACTCGG GATATTCGAT CTATCAATGC TATTGGCTAG AAAGGCTGGG GTATTTGTGG TGCAAGCCGT AGGGAATAAT GGCCCGTCAC CGTCTTCTGT CTTGTCTTAT AGTCCGTGGG TCGTCGGGGT TGCCGCAGGA AGTACGGACC GGTCTTATCC TGCCTCCCTT ATTCTTGACG GTGGCCAGAC CGTTTATGGC GTCGGCCTAT CAGGTCCAAC CCTTGGAGCT CCATTACTTC AACACAGGCT AGTCTTAGCC AGAGACGCTG TTAGAACAAA CGGCTCGGTT CTACAACCCC TAAGAAGTGA CATTGAAGAA TGCCAGCGTC CAGAGAATTT TGACCCAGCC GCGGTTTTTG GAACTATTGT GATATGTACA TTTTCTGATG GCTTCTACAA TCAGATGTCG ACCGTTCGAG CCATCACCCA AACCGCTAGG AATCTTGGTT TCATGGGTTT TATACTCATT GCAAATCCTA GATTCGGTGA TTATGTTGCA GAACCAGTGT TATTTTCGGC TCCTGGTATT CTAATCCCTA CAGTATCAGC TGCCCAGATT ATTTTGAGGT ACTACGAAGA GAAAACCTAC AGAGACAAGA GAGGAATAGT GACACAATTT GGGGCACGTG GAAGAATTGA TGAAGGACGG AACTCGGTCT TCGCCGGAAA AGCACCGGTC GTGAGCAGAT TCTCTTCGAG AGGACCAGCT TTTATTGATG CAAATCGGAA TCTTTTAGAT GTGCTTAAGC CAGATATTCT TGCACCTGGT CACCAAATAT GGGGAGCCTG GAGCCTCCCT AGTGCCTTTG ATCCTATTCT CACTGGACGG AGCTTTGCAA TATTGTCGGG AACAAGCATG GCCACTCCTC ATATAGCGGG GATTGGTGCA CTCATAAAAC AGCTTAATCC TTCTTGGACT CCGGCCATGA TTGCATCGGC CATCTCCACC ACGGCCAACG AATACGACAG TTCTGGTGAA GTTATATCAG CGGAGTCTTA TGAAATAAGT GGATTATTTC CTTCTAATCA TTTCGATCAT GGCGCGGGCC ATGTTAATCC TGCTAGAGCC TTAGATCCTG GACTGGTTTT ACCCGCTGGT TTTGAAGACT ACATAAGTTT CTTGTGTTCA CTGCCAAACA TTAACCCGGT CACAATTCGA GCCGCAACTG GAGTCTCGTG CACCACTGCA CTTAGCCACC CGGCGAACCT TAACCATCCG TCAGTGACTA TATCTGCCCT TAAAGAGTCA CTTGTGGTGA GAAGAAGTTT CCAAAACGTC TCAAACAAGA CTGAGACATA TCTTGGTTCG GTTTTACCTC CCAATGGTAC AACTGTACGG TTAACCCCAT CTTATTTTAC CGTACCACCA CAGAGAACTC AAGATCTGGA TATCGAATTC AATATCACAC AAGTCTTAAC CAAGTTCACA TTTGGTGAAG TTGTTCTTAC CGGAAGCTTA AACCATATTA TAAGAATACC GTTGTCAGTT AAAACCATTT GAAAACATAA AATTTTCTTG TT 
Length2542
Protein Sequence
Protein Residue
Map Locationscaffold_2: 1671376.. 1675760
Download Sequence
A.thaliana
AGI-codeAT1G62340.1
DescriptionPA-domain containing subtilase family protein
TAIR curator summarySubtilisin-like serine protease required for epidermal surface formation in embryos and juvenile plants
Alias[ALE][ALE1][ABNORMAL LEAF-SHAPE][ABNORMAL LEAF-SHAPE 1]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg907708
3.4641 Ahg933736 Domain of unknown function (DUF313)
5.19615 Ahg936577
11.0905 Ahg942510 transposable element gene
12 Ahg924611 root hair specific 8
14.8324 Ahg913800
17.2916 Ahg923064
18.7617 Ahg933123
20.4939 Ahg947612
20.7846 Ahg481434 Integrase-type DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression