| Annotation |
|---|
| Description | jgi|Araly1|925075|scaffold_200636.1 |
| Sequence |
TGTAATTGAT ATTACAAAGA GATGAAGAGG GTTAGAGATG AGGTTTACGT TGACGGACAG ATACGAGCAC CTACTGTTTC CTCTCGAGGA GAAACAAATG GAAGGCCTTT AACGATTGGT GGAGGAGGAA CTACGGGAGC GCTAACAACA GATGCTGCTT TGACATATCT CAAAGCTGTG AAGGATATGT TTCACGACAA TAAAGAAAAA TATGAGACTT TCCTTGGAGT CATGAAGGAC TTCAAAGCTC AGAGAGTTGA CACTAATGGC GTCATAACAA GAATCAAAGA TTTGTTCAAG GGCTATGACG ACTTACTTTT GGGTTTTAAT ACCTTCTTGC CGAAGGGGTA CCAAATTACC CTTCAGCCCG AGGATGAGAA ACCTAAGAAG CCAGTGGATT TCCAAGTAGC TATCGAATTT GTCAATAAGA TTAAGGCGCG ATTTGGAGGT GATGAACGTG CATATAAAAA ATTCCTAGAC ATCTTGAACA TGTATAGAAA GCAAACCAAG TCCATCAACG AGGTCTATCA AGAGGTTACT CTGTTGTTCC AGGACCATGA AGATCTGCTC GGAGAGTTTT TTCATTTCTT ACCTGATTTT CGAGGATCAG TTTCTGTTAA TAACCCTCTT TTCAGAAGGA ATACAGTACC GCATGATAGA AATTCACCAT TTCATGCCAT GCATCCAAAG CATTATGAGA AGAAAATAAA ACGGAGTAAG CATGATGAGT ATACTGAACT CTCTGATCAA CGAGAAGATG GTGATGAGAA CCTTGTGGCC TACTCTGCTG GTAATTCTCT GGGAAAATCC CTTGCTAATC ATGGTCAATG GCCAGGATAT CCTAAGGTAG AGGACACCGA GGGGATTCAA AATTATGAAA ATAACGGGGA TTCAAAAAAT CTGCTGTCTA CCAACCATAT GGCCAAGGCA ATAAATGAAT TGGATCTTGC TGGCTGCGCA CAATGTACAC CAAGTTATCG TCGCCTGCCA GATGATTATC CCATTCATAT TCCAAGCTAC AGAAATTCAC TTGGTGAAAA GGTACTTAAT GATCATTGGG TATCTGTGAC ATCGGGGAGT GAGGATTACT CATTCAAACA CATGCGCAAA AACCAGTATG AAGAAAGCTT GTTTCGATGT GAGGATGATA GATGCATTGA GCGGTTATAC GGGGATTATG GGCTTGATGT CGTGGATTTT TTGAAGAAGA GTTCTCATAC TGCCTTACCG GTGATACTAA CACGCTTGAA GCAAAAACAA AAAGAATGGG CTAGGTGTCG CTCTGATTTC AGGAAAGTAT GGGCTGAAGT ATATGCTAAG AATCATCAAA AATCACTCGA TCATCGTAGT TTCTATTTCA AGCAGCAGGA CTCCAAGAAT TTGAGCACAA AAGGTTTAGT GGCGGAAATT AAAGATATCA GCGAGAGGAA GCATAAAGAA GACCTTATTC GTGCCGTTGC TGTTGGAAAT AAACCCGCTT TCACCCCAGA TATGGAGTTT AGTTATACTG ATACACAAGT TCATACTGAC CTATATCAAC TAATCAAGTA TTATTGTGAA GAAATATATG CTACTGAACA GGCGGATAAA GTCATGGAGC TGTGGGTAAC TTTTTTGGAA CCAATGCTTG GTGTTCCTTC TAGGTCTCAA ACTAATGAGA CAATGAAGGA TGTTGCAAAT ATCGAAGACA ACCAAGCGCA CCATGATGCA TGTGAGGCAG TGAAGGAAAA CACATGTGAC GGTTCTTTGG CCTTAAACCT TAAACCGTTA ACACCTCCAA AATCGCCTAA CAAAGAAAAC CCAATATTAC AAGGAAGCTC TTTTCCGCAA GATATCCCAC TCAATACACT AGAAAGCATT CATCAAGATA AAATGCATGA TGGTGCAACT ATAACTAATG AGGTTCTGCA GGATAGCCAG CCTTCCAAAC TGGTGTCACC CAGAAATGAT ATGATAATGA AGGGTGTAGA GAATTGTAGT AAGGTTAGTG ATGTATCAAT GGGAGAGCAT AAGGTCGAGC GTGAAGAGGG TGAATTATCT CCCACTGAAA TTTTCGAGCA CGAAAATATT GAGGTTTATA AAGAGAATGG GCTCGAGCCT GTACAGAAAC TGCCAGACAA TGAAATAAGT AATAAAGATC GAGAATACAA AGAGGGTGCA TATGGTACTG AAGCTGGAGC AAGAAGCAAT ATCAAACCTG AAGATGATGA AAATAAAATT ACTCAAAAGT TATCAGAAGG GGAAGAAAAT GCCTCTAAAA TTATTGTCTC AACAAGCAAG TTTGGTGGCC AAGTTTCTTC CGATGAAGAG CATAAAGGAG CTATGAACTG TGACCGGCGT GATAGTGTGG CTGAGAGTGA AAACGAGGCT GGAGGGATGG TTAATTCTAA CGAGGTTGAA GATGGATCTT TTGTCACATT TTCAGAACGG GATCTGCAAC GTGTAAAGCC CCTTGCAAAG CATGTGCCTG GGACACTGCA AGCAAGTGAA TGTGACTCCC GGAATGATTC TCGAGTTTTC TATGGGAATG ACTCATTTTA TATGCTTTTT AGGCTTCATC AAGTAAGGGC TACGAAACAC AACCTTCTCT TGTTCCTCAA ATGTCAATTG TCTCGGTTCA AACTGTTAAT TCTGCTGATT TTCCAGATCT TGTACGAGAG AATACAATTA GCAAAGATAC ATTCAGAGAG GAAATCGAAA GCTCCAGATA GCACATCTAC TGATTCTTAT ACCAGGTTCA TGGATGCCCT TTATAATTTA CTTGATGGCT CTAGCGACAA TACAAAGTTT GAAGATGAAT GCCGAGCTAT TATTGGAGCA CAGTCATATG TTCTCTTCAC ATTGGACAAG CTAGTTCAAA AGTTTGTTAA GCATCTTCAT GCAGTCGCAG CGGATGAGAC AGACACCAAG CTTCTGCAAC TATATGCATA CGAGAACTAT AGAAAACCTG GAAGATTCTT TGATATGGTG TACCATGAGA ATGCTCGAGC CCTTCTCCAT GATCAGAACA TATACAGAAT TGAATATTCA TCTGCCCAAA CCCGTCTCTC GATTCAACTT ATGAACAGAG GGAATGATAA GCCTGAAGTT ACAGCTGTAA CAGTGGAACC AGGTTTTGCT AATTATCTAC AGAATGACTT TCTCTCGTTT GTCAGTGATG AAGAGAAACC CGGACTATTT CTGAAGAGGA ACAAGGCGAA ATTAAGCGGT CCGGGTGATG AATCTTCAGG GACGTCGCGT GCAATGGACG GACTAAAAAT TATCAATGAG GTCGAATGTA AGATAGATTG CAGTTCTTTC AAGGTCCAGT ATGAACCAAA CACAACAGAT ATTTTATATA GAAGAAAGCA GAAGAAAGCA ATACTGAATC CAACTGGGCC TGAAAATGTT AAAACTTCTG ATAGTATTGA ACTCTCGAGA AAGGAAAGAA TATCGCGCTT TCACAAGAGT CTTAACCGCA GACTTGTTGC TTTGCCTTAA TGCAAGAACG TCGTAAGTAA |
| Length | 3500 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 3225117.. 3231193 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G59890.2 |
| Description | SIN3-like 5 |
| TAIR curator summary | |
| Alias | [SNL5][SIN3-like 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 24.2693 |
Ahg895151 | Protein of Unknown Function (DUF239) |
| 46.6262 |
Ahg316907 | |
| 48.2183 |
Ahg915039 | |
| 68.4324 |
Ahg478320 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 88.4195 |
Ahg897183 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| 89.666 |
Ahg351609 | Protein of Unknown Function (DUF239) |
| 95.0789 |
Ahg899837 | Domain of unknown function (DUF313) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|