Detail



ID : Ahg925103

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925103|scaffold_200664.1
Sequence
TAAAATTTAC AAAAAAAAAA AATGGTTGCA TACATGAAGA GTCCTATTGT TTTTCTATTT GCTACAATGA TGATTATATT ATTTATGTTT TGTGGAAGTG GAGAAGCAAG AACATTAGGG TACGGATCTG TACTTGGAAA AGACAAAATT CCGGCATGTG GCTACAAAAA CCCCAATTCA TGTGTCAAAC AACCAGTTAA CCATTACCAT AGAGGTTGTG AAAAACTTAA CAGGTGTGGT CGTGATGCTG ACTCCTTCCA TATCGATGAA ACATTTATTA ATCTCCATTA AAATCGAATC TTTACTTTCG T 
Length311
Protein Sequence
Protein Residue
Map Locationscaffold_2: 3415272.. 3415582
Download Sequence
A.thaliana
AGI-codeAT2G32835.1
DescriptionRALF-like 16
TAIR curator summaryRapid alkalinization factor (RALF) family protein. Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
Alias[RALFL16][RALF-like 16]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg486591 low-molecular-weight cysteine-rich 53
8.7178 Ahg474323 Mannose-binding lectin superfamily protein
9.48683 Ahg888832 SCR-like 25
9.94987 Ahg945968 Tetratricopeptide repeat (TPR)-like superfamily protein
10.4881 Ahg932766
13.3041 Ahg495296 SNARE-like superfamily protein
14.5945 Ahg902237 TRAF-like family protein
16.2481 Ahg916527
16.4317 Ahg358316 zinc ion binding
16.7332 Ahg895742
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression