Detail



ID : Ahg925221

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925221|scaffold_200782.1
Sequence
CCTCATCACC AATCCGAAAG ATGTGTACGC AGATATCACA TTCCTCGCTT ATAAAAGCAG TACAGACAAG TACCAATCAT ACCAAGTTTG ATTGGTTTGC AGAGACCGAT GCGCAGCGAT TTCATTTGTT TAAACAACAG TGGGGACTAT TAACTTTTCT TCCGCTTGAA TATTTTAGAA ATCCGGGATA TGGATACTCT TTCGACGACG GAAGCGTTGT GTTTGGCGTT GACATCAACA CTTTGAAAAA TGGGAAGTTT TCTCTAACGA ACAAAACATT CGTGACCCTA TTTTCGAATG GAGGCTCACC AAATTCTCTA CACTCTTTCA TGACTCTTAC ACTTCTGATT ACTTTTCTTC CGGTGGAAGA AACTGTGTAT CCAAATGGAG TTGGAAATGC AACGGGTAAT TCGTTGTCAC TCTATTTGTT GAATGAGTCA AATGATAAGG GTTACGTGGA AGCCAAGTTA CAAATTATTG ACCAGAACCA ATCCAACCAT TTCGTGAAAA AAAGGTTTAT ACCTTTTTCA GATCGCAGAA ACGCATCCAA AGGTTATGTC GTCAACGATA CCCTCAAATT TCAAGTCGAG ATCTTGTCCT TCTCGAAAAC CGACTTCTAC TCTCATCAGT CGTCTGTTGT TCTTCCTATT TCAACTGGAG ATAGTACTTA GGTGACTAAT CTTTGCTATG T 
Length691
Protein Sequence
Protein Residue
Map Locationscaffold_2: 4225520.. 4226502
Download Sequence
A.thaliana
AGI-codeAT1G58270.1
DescriptionTRAF-like family protein
TAIR curator summaryZW9 mRNA, complete cds
Alias[ZW9]
Gene coexpression
MR
MR Locus Description
11.7473 Ahg932652 phospholipase Cs
13.2288 Ahg887694 Plant invertase/pectin methylesterase inhibitor superfamily protein
18.9737 Ahg891068 myb domain protein 79
19.4422 Virus1173
27.1662 Ahg906271
28.4253 Ahg908543 TRAF-like family protein
36.1248 Ahg946045 Uncharacterised protein family (UPF0172)
39.8623 Ahg497294 Ypt/Rab-GAP domain of gyp1p superfamily protein
42 Ahg931715
45.0555 Ahg936922
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression