Detail



ID : Ahg925222

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925222|scaffold_200783.1
Sequence
TTGAGCCATT TAAGCCGGTA CGGATGAGGA TGCTTTGTCT TGGTGAAGCT GTAGAGAATG GCGGTCTCGA GCAAAAAGAG AAAGAGCATA TGGACGCAAT ATACCTAGCT CTTGATTGCT TTTTCAGCTT CAACTTAACA AATTACATCC CTTTTCTTAG TGGGTGGAAC GTAGATAAAG AGGAGAAGGA GGTAAGAGAA GCGGTTCATA TAATCAACAG ATGTAACGAC CCGATCATCC AAGCCAGAAT ACGTTTATGG AGGAAGAAAG GCGGAAAAGC TACAGAAGAA GACTGGCTCG ATATCCTCAT CACGTCAAAA GATGATCAAG GAATGCATCT GTACACATTT GATGAGATTA GGGCTCAATG CAAGGAAATC AATTTAGCAA CAATTGACAA TCTGATGAAT AACGTGGAGT GGACGATAGC GGAGATTCTG AACCATCCAG AAATTCTTGA GAAAGCCACA AATGAATTGG ACATGATAGT TGGGAAAGAC AGACTTGTGC AAGAATCAGA CATACCAAAA CTCAACTACA TCAAAGCTTG TAGCAGAGAA TCTTTTCGGC TACACCCAGC TAATGTGTTC ATGCTTCTCC AAGGGTTCGA ATGGACTCTC CCTAATGGTA AAACTCAAGT CGAACTCATT TCGGCGGAGA GCAACTTGTT TATGGCCAAG CCTCTACTCG CATGCGCGAA ACCTAGGTTG GCTCCAAGTT TATATCCGAA AATCCAGTTC TAAAATTTCT ACAAGTTGTT TGG 
Length763
Protein Sequence
Protein Residue
Map Locationscaffold_2: 4226819.. 4227843
Download Sequence
A.thaliana
AGI-codeAT1G58260.1
Descriptioncytochrome p450 79c2
TAIR curator summarymember of CYP79C subfamily of cytochrome p450s. Encodes a putative xylan endohydrolase. similar to some closely linked pseudogenes.
Alias[CYP79C2][CYP79C3P][cytochrome p450 79c2]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg929518 F-box and associated interaction domains-containing protein
8.12404 Ahg927757
8.48528 Ahg930420
8.66025 Ahg951102 Ribosomal protein S19 family protein
9.16515 Ahg928699
12.0416 Ahg910785 nucleobase-ascorbate transporter 8
13.6382 Ahg940017 UDP-Glycosyltransferase superfamily protein
14.2478 Ahg906697
14.6969 Ahg925309
16.6132 Ahg486685 Protein of unknown function (DUF688)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression