Detail



ID : Ahg925664

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925664|scaffold_201225.1
Sequence
GTGGGAAGAT CCATAAGTTT AAATGTCTTT CGGGTCTATT CGTTGTCTTA TTATTCGTTG CTCTAGTAAC CTGAGCAATT TTCCAGGAAC GGTAACACCG GGAATACCCG CGGGCTTTCG CAGTTTTTGT TCAAAGTATT CTGTTACTGA TTTGGCGCTG AACTCGGTTG TGAAAGTCTT TTGCCGCTCT ACCAAGTCTA GCGTGTTACA ACCTTGGCAG AAAAGGCTAC CACATAGATC GACCGGTTCA GGATTTGTAA TCTCTGGAAA TAAGATTCTT ACGAATGCTC ATGTAGTGGC TGATCACACT TTCGTGCAAG TTAGAAAGCA TGGTTCACCA ACAAAGTACA CAGCAAAAGT TCAAGCAATG GGGCATGAAT GTGATTTAGC GATTTTGGTA ATCAATAGCA AAAAGTTTTG GAAGGATATG AAGCCCTTGG ACCTCGGAGA CGTACCCTCT CTATACGAAA CTGTATCTGT TGTTGGATAC CCTCAAGGTG GTGACAACAT TTCCATTACC AAAGGTGTTG TCTCTAGAGT TGAAGTTACA AAGTATAGTC ACAGCCAATC TAAGCTAATG ACAACACAGA TAGATGCGGC TATTAATCCA GGAAATAGCG GTGGTCCAGT GATCATGGAA AACAAAGTCG TTGGTGTAGC ATTTCAAGGT CTTTCACGCT CACAAAATAC AGGCTACATA ATCCCAACTC CAGTAGTTAA CCATTTCTTA ACTAGTGTTG AAGAAAACGG TCAATTTGTT GGGTTTTGTT CACTAGGTAT ATCATGTCAG CATATGGAGA ATACTCATTT CCGTAACCAC TTTAAGATGG GCCCTAAAAT GACAGGGATT CGAATAAGAA AAATAAATCG GTCGTCGAGT GCTTACAATA TTCTGAAAAA GGATGACATT CTTCTCGCAA TTGATGGTGT TCCTATAGAA AACGATGAGA CAGTTATTTT TCGGAAGAAG GAACGTATAA ATTTCAGTCA TTTGGTTTCT ATGAAGAAAC CAGGTGAAAA AACGTCACTC AAAGTCTTAA GAGAGGGAAA GAAACATGAA TTCAATATCA ATATAACACC TGTGGAATCA CTACTACCAG TATATCATTT TGATAAGCTT CCAAGTTATT ACATATTCGC GGGGTTTGTC TTCTTGCCTC TCACTAAACC ATACCTCGAT TGTTCTTATA GTATGTGCGA TTGTGCATTG ACACATATGC CCAAAAAACC CGGTGAACAG ATCGTCATAA TTTCTCAGGT GTTAGAAGCT GACGTCAGTG TAGGATACGC CAATTTAACA GATTTGCAGG TGAAGCGAGT GAATGGAGTA CAAGTAGAGA ATCTGAAACA TCTATGTCAG CTCATAGAAG GATGCTGCAC CGAAGATTTG AGGTTGGACT TGGAAGGTGC GTTTGCTATC ACCCTCAACC AAAATTATGC GAAAAAGGCC ACTGCTAAGA TTTTAAAACG TTATGGAATA CCATCGGCCA TGTCTAAGGA CCTTCGATCT TAGTAATCGG ATTAGAATTG AAG 
Length1533
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9277502.. 9279978
Download Sequence
A.thaliana
AGI-codeAT3G16540.1
DescriptionDegP protease 11
TAIR curator summaryEncodes a putative DegP protease.
Alias[DEG11][DegP11][degradation of periplasmic proteins 11][DegP protease 11]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg482450 hydroxyproline-rich glycoprotein family protein
6.32456 Ahg930671
7.74597 Ahg946833 Protein of Unknown Function (DUF239)
7.81025 Ahg923385 alpha/beta-Hydrolases superfamily protein
17.2337 Ahg938682 Protein of unknown function (DUF677)
18.4932 Ahg328884 Low temperature and salt responsive protein family
18.6548 Ahg491757
25.807 Ahg900378
27.2764 Ahg489619 Transducin/WD40 repeat-like superfamily protein
29.4618 Ahg931891
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression