Detail


ID : Ahg925813

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925813|scaffold_201374.1
Sequence
GAAACTTGTT GAATCGCGAA GATGGCATCA AACGGATTCT TCTCTGCTCA AAGAAACGCA CACCGTAACG CAAACGCTGG AACAACGTTG AAGAGACGAA TCGACAACAA TCGCGGTTAC GGAATCGGAG ATTTACAAGA GGAAAGGAAC CGTTACGTGC CGCCGCAAAA ACGTTTCAGA TCGCAAACGC AACCGCAAAC GAATTTCCGA TCTGGTCATA TTCCTCTGTA TCATCATCAT GGTAGAAATA ATAATAACAT GTCTAGGGTT TCTTCTCAAT CATATAACAA TTACGGTGTT GATGTGATTG CTTCTAATTC AAGTTTTCCA TTACGTAACA ATGATTCTAA CATCAACAAT TATCAGAAAC CCTTTATTGT TGGTTATGGA AACCCTAATC CCCAAATTGT TCCTCTTCCA TTACCTTATC GTAAGCTTGA TGATGATGAT TCGTTGCCTG AATGGGTTCC GAATTCAAGA ACCCTAACTC CGAATTTTGT ACCAAACACT TATGTTCAAA ATCCGATGAA TCATTCGAAC ATGGTTTCAG TTGTGTCACA AACGATGTCT CATCATCAAC CAATTGTTTT GAGCAAAGAA TTGTCTGATT TACTTAGCGT TCTTAGGAAT GAGAAAGAGA AGGAAACTTC AGAAGCAAGT AAAAGTGATT CATTGCCCGT TGGATTAAGC TTTGATAATC CATCGTCGTT GAATGTGCGA CATGAATCTG TGATTAAGTC TCTGTATTCG GATATGCCGA GGCAATGTTC GTCGTGCGGG GTTAGGTTTA AATGTCAAGA GGAACATAGC AAGCATATGG ATTGGCATGT AAGGAAGAAC AGGATGGCTA AAACCACTAT GAGATTGGGC CAGCAACCGC AGAAATCGCG GGGATGGTTG GTAAGCGCAT CTTTGTNNNN NNNNNNNNNN NNNNNNNN
Length938
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9503692.. 9504607
Download Sequence
A.thaliana
AGI-codeAT5G43620.1
DescriptionPre-mRNA cleavage complex II
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
25.9808 Ahg477331 Protein kinase superfamily protein
43.0349 Ahg944463 redox responsive transcription factor 1
45.3762 Virus1617
54.8635 Ahg473310 Glycine-rich protein family
60.8441 Ahg950444 Xyloglucan endotransglucosylase/hydrolase family protein
64.2962 Ahg887750 F-box/RNI-like superfamily protein
73.9594 Ahg925763 CYS, MET, PRO, and GLY protein 1
85.9069 Ahg486190
89.6103 Ahg477161 WRKY DNA-binding protein 40
99.5289 Ahg927573 Calcium-binding EF-hand family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression