Detail



ID : Ahg926334

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926334|scaffold_201895.1
Sequence
AGCTCCGGTT ATGGGGAGAG AATGAGGAGT TACCGGTTTA GTAGTGATTG TGTACTCATG TCAGTTTCAT CCTCCGATTT TTCTAACGAT ATGGATTTGT TATGTGGAGA AGATTCCGGT GTGTTTTCCG GTGAATCAAC GGTTAATTTC TCGTCTTCTG AGGTTGATTC ATGGCCGGAT GATTCTATCG CTTGTTTTAT CGAAGACGAG CGTCACTTTG TTCCTGGACA TGATTATCTC TCTAGATTCC AAACTCAATC TCTCGATGCT TCCGCTAGAG AAGACTCCGT CGCATGGATT CTCAAGGTAC AAGAGTATTA TAACTTTCAG CCTTTAACGG CGTACCTCGC CGTTAACTAT ATGGACCGGT TTCTTTACGC TCGTCGATTA CCGGAAACGA GTGGTTGGCC AATGCAACTT TTAGCAGTGG CATGCTTGTC TTTAGCTGCA AAGATGGAGG AAATTCTCGT TCCTTCTCTT TTCGATTTTC AGGTTGCAGG AGTGAAGTAT ATATTTGAAG CAAAAACGAT AAAGAGAATG GAACTTCTTG TTCTAAGTGT GTTAGATTGG AGACTAAGAT CCGTTACACC GTTTGATTTC CTTAGCTTCT TTGCTTACAA GATCGATCCT TCGGGAACCT TTCTCGGGTT CTTTATCTCC CATGCTACAG AGATTATACT CTCCAACATA AAAGAAGCGA GCTTTCTTGA GTACTGGCCA TCGAGTATAG CTGCAGCTGC GATTCTCTGT GTTGCCAATG AGCTCCCTTC TCTGTCCTCT GTTGTAAATC CCCACGAGAG CCCTGAGACT TGGTGTGACG GATTGAGCAA AGAGAAGATA GTGAGATGCT ATAGACTGAT GAAAGCGATG GCGATAGAGA ATAATCGGTT AAATACACCA AAAGTGATAA CAAAGCTTCG AGTAAGCGTA AGGGCAGCAT CAACGTTAAC AAGGCCAAGT GATGAATCCT CTTTCTCGTC ATCATCTCCT TGTAAAAGGA GAAAACTAAG TGGCTATTCG TGGGTAGGTG ATGAAAATTC TACCTCTAAT TAAAATGTGG GGAGTGAGAC TAG 
Length1073
Protein Sequence
Protein Residue
Map Locationscaffold_2: 13428044.. 13430079
Download Sequence
A.thaliana
AGI-codeAT1G70210.1
DescriptionCYCLIN D1;1
TAIR curator summaryEncodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination.
Alias[ATCYCD1;1][CYCD1;1][CYCLIN D1;1]
Gene coexpression
MR
MR Locus Description
11.7473 Ahg491950 expansin B3
12.1244 Ahg477690 Li-tolerant lipase 1
15.4919 Ahg494310 beta HLH protein 71
18 Ahg939208 RING/U-box superfamily protein
18.9737 Ahg487523 Eukaryotic aspartyl protease family protein
24.4949 Ahg490341 glycosyl hydrolase 9B13
24.6577 Ahg494887 Actin-binding FH2 (formin homology 2) family protein
27.1293 Ahg483813
28.3549 Ahg495659 FASCICLIN-like arabinogalactan 1
33.4365 Ahg475879 Pectate lyase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression