Detail



ID : Ahg926427

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926427|scaffold_201988.1
Sequence
TATTTTGTAC GCTCCAAAGA ATGGGAGAGG TGGTGTGTAC TGGTGCAATC GTTACACGCA ACTCTACATC GAACACAGTA GAGATCAAAG TATCGCGTCT AAACAATCTC ACTTCAGGAA CAAACGATTC TCCTCCGTTC CCAACCCCTT ACCTCCTTTT GGACAACATC GTTAGCTTTG ATGAACACGA CATGTATGTT CTCCTGTATC CAAGGCTCCA AGATCCCAAC TTATGCCGTA TTCTCTCCTC CGAGATTGCT TCCAAAGCCA AGCGAGTTCA AGGCTCCTTT GACGTCACAA TAGAACAATA TATAATCGAG GAAGAAACAT GCGCTATTTG CTTGGAGGAT GATGATGATG AATACTTAAC CGAAATGCCA AACTGTACGC ATGAGTTTCA TAGTGAATGT ATCACTGCGT GGTTATGTAT GAGTAATAGT TGCCCTACCT GCCGTGCTCC AATTCTGGAT GACTACGACT GTACGAGTGA CGACGACTCT ACGAGTGACG ACGGCTCTAC GAGTGACGAC GAAAGTAGTG AATAGGGTTT TTATATTACT GATATT 
Length566
Protein Sequence
Protein Residue
Map Locationscaffold_2: 13808337.. 13808882
Download Sequence
A.thaliana
AGI-codeAT1G70910.1
DescriptionRING/U-box superfamily protein
TAIR curator summaryEncodes DESPIERTO (DEP), a RING finger protein involved in ABA sensitivity during seed development. Regulates the expression of ABI3, and produces a complete loss of dormancy when mutated.
Alias[DEP][DESPIERTO]
Gene coexpression
MR
MR Locus Description
10 Ahg947206
10.1489 Ahg906742 Leucine-rich repeat (LRR) family protein
26.1534 Ahg932496
34.322 Ahg935287 Mannose-binding lectin superfamily protein
38.8844 Ahg918741
42.6615 Ahg477017 Protein kinase superfamily protein
42.7083 Ahg485695 myb domain protein 27
54.7996 Ahg920601
77.5564 Ahg316691 Glycosyl hydrolase superfamily protein
83.3367 Ahg486726 VANGUARD 1 homolog 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression