Detail


ID : Ahg926472

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926472|scaffold_202033.1
Sequence
CGTCGAGATC ATGCGAAGGA ATGCTCCTCA GGCGGAGGAT ACTATCGCTC ACTGCGTCGT CGTTCAGAAA CTGCAATTCC GGTAACAACG GCGACGCTAT CTCTTCTACA TCTCCGTTCT CTACCTTCAC GAAACCTTCT TCTTCAATCG CTCCCGGAGA TTTCCTCGTT CGCGAATGGA AAGACTGGTT TAAGCAGCGA GATGTGAAAC AGAGCCATCA GTTAATCGAT CGAATCTTTG ACATCCTTCG AGCTCCTTCT AACGATGGAG ATGATCGAGC TTTTTACCTC CACCTCTCCA ATCTCCGACT CCGTCTCACT GAGAAATTCG TCCTCGACGT GCTTACACAC ACTCGTTACG ATATCCTCTC ATGTCTCAAA TTCTTCGATT GGGCTGCTCG TCAGCCTGGA TTTCATCACA CGCGTGCTAC TTTTCATGCT ATCTTCAAGA TCCTTCGTGG TGCTAAGCTT GTGACTCTTA TGATTGACTT CTTGGATCGA AGTGTTGCTT TTGAAGGTTA CCGTCATTCT CTTCGTCTCT GTGATGCTCT CGTTGTTGGA TATGCCGTCG CTGGTCGTAC TGATATAGCT CTTCAGCACT TTGGTAATAT GAGATTTCGA GGTTTGGATT TGGATTCTTT TGGGTATCAT GTACTGCTGA ATGCACTTGT GGAGGAGAAG TGTTTTGATA CTGTTGATGT CATCTTCGAC CAGATCTCCG TGCGCGGCTT CCTCTGCGCT GTTACGCATT CCATTTTGGT GAAGAAGTTG TGCAAGCAAG GGAAGCTTGA TGAGGCTGAA GCTTATCTTC GAGCCTTGCT CCCTAATGAG CCTGCTGGAT GCGGTTCTGG CTTAGGCATA TTGGTTGATG CTCTATGTTC CAAACGAAAA TTTCAGGAAG CTACTAAATT GTTAGACGAG ATCAAAGTGG TGGGAACTGT GAATATGGAC CGTGCTTATA ACATTTGGAT TAGGGCGCTT ATTGGAGCTG GATTCTTAAA CAACACTGCG GATTTCTTGC AAAAGATTAG TCCTTTAGAA GGTTGTGAAC TCGAAGTTTT CAGGTATAAC TCTATGGTCT TTCAACTTTT GAAGGAGAAC GATCTTAATG GTGTGTATGA TATCCTGACG GAGATGTTGG TACGTGGAGT TTCGCCTAAT AAGAAAACGA TGAATGCAGT TTTATGCTTC TTTTGCAAAG CTGGATTTGT AGATGAAGCC CTCGAGTTAT ACCGGTCGAG GTCAGAAATT GGCTTTGCTC CTACCGCCAC GTCTTACAAC TATCTGATTC ATACCCTTTG TGCCAATGAA AGTGTCGAAC AAGCTTACGA TGTCTTGAAA GGGGCAATGG ACCGAGGGCA TTTTCTTGGT GGAAAGACAT TTAGTACACT TACCAATGCC TTGTGCTGGA AGGGGAAGCC TGATATGGCA AAGGAGCTGG TTATTGCTGC CGCAGAACGG GACTTATTAC CTAAACGTTT AGCTGGTTGC AAGATTATAT CAGCTCTTTG TGATGTTGGG AAAGTGGAGG ACGCTCTTAT GATTAATGAG CTATTCAATA AAAGTGGTGT AGACACCTCC TTCAAAATGT TCACTAGCTT GATATATGGC TCAATCACAC TAATGAGGGG AGACATAGCT GCTAAACTTA TCATCAGGAT GCAGGAAAAG GGCTACACCC CGACCCGTAG TCTCTATCGA AATGTTATTC GATGTGTTTG TGAGATGGAA AGTGGTGAAA AAAACTTCTT TACTACTTTG CTAAAGTTTC AGTTGTCTCT TTGGGAACAT AAGGTTCAGG CCTACAACTT ATTCATTGAA GGAGCTGGGT TTGCAGGAAA ACCAAAACTT GCAAGATTAG TGTATGATAT GATGGATAGA GATGGGATCA CGCCCACACT AGATTCAAAC ATTCTCATGC TTCAGAGTTA TCTTAAAAAC GAGAAAATCG CCGATGCTCT TCACTTTTTC CATGACCTGC GAGAAAAAGG TAAGACCAAG AAAAGACTCT ACCAGGTTAT GATTGTTGGC CTCTGTAAAG CAAATAGACT GGATGATGCT ATGCATTTCT TGGAAGAAAT GAAGGGTGAA GGACTACGGC CTAGTATTGA ATGTTACGAA GTAAACATAC AAAAATTGTG CAACGAAGAA AAGTATGATG AGGCAGTTGG ATTAGTCAAC GAATTTAGGA AAAGCGGGCG TCGTATTACA GCTTTCATCG GTAATATCCT TTTGCATAAC GCAATGAAGA GCAAAGGGGT GTATGAAGCA TGGACACGGA TGAGAGATGT AGAAGATAAG ATCCCTGAGA TGAAGTCACT TGGTGAGTTG ATAGGAGTAT TTTCGGGAAG AATCGATATG GAAGTAGAAC TGAAGCGGTT AGATAAAGTT ATAGAGAAAT GCTATCCTCT TGATATGTAC ACGTACAATA TGCTGTTGAG AATGATTGTA ATGAACCAGG CAGAAGATGC ATATGAGATG GTAGAAAGAA TAGCACGGAG AGGATATGAG CCTAATGAGC GGACTGAAAG GATCCTTGAA CGGGCTGACC GCATTCTAGA GGGACGGAAT TCAAGGTCAA ACGTAGGGAG GAATGATTGG AATAGCAGAC AGAGGCAACT TGAATGATGA AAAGTATGTC ACGGAGAGGT C
Length2651
Protein Sequence
Protein Residue
Map Locationscaffold_2: 13952038.. 13954688
Download Sequence
A.thaliana
AGI-codeAT1G71210.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.16441 Ahg492485 Leucine-rich repeat (LRR) family protein
18.8149 Ahg492249 FtsJ-like methyltransferase family protein
25.4558 Ahg908068 Zinc knuckle (CCHC-type) family protein
25.923 Ahg490505 K+ efflux antiporter 1
30.9354 Ahg925447 RNA polymerase subunit alpha
32.5883 Ahg924144 Ribosomal protein S5/Elongation factor G/III/V family protein
38.6523 Ahg924484 NAD(P)-binding Rossmann-fold superfamily protein
40.398 Ahg903674 3'-5'-exoribonuclease family protein
41.2311 Ahg928820 Outer membrane OMP85 family protein
41.7133 Ahg492732 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression