| Annotation |
|---|
| Description | jgi|Araly1|926477|scaffold_202038.1 |
| Sequence |
TTCTCGGAAT TGTGTAGAAG ATGATGAAGC AAGTTCGCAC TTTGCTCTCC AGGAGCCTTT GTGACCAAAG TAAGTCACTT TTCGAAGAGA GAGTTAAAGC TTCGACGTTG CGTGGTTTTG CAAGCTGGTC AAGTTCTTCT ACGCCTGGAC GTGGTTTCTC TGGTAAAGAT GCTCCAAAGC CTAGTGGTCG ATTGTTCGCA CCTTATTCTA TTTTCAAGGG AAAAGCTGCT CTCTCTGTTG AACCTGTTCT TCCCACTTTC ACCGAAATCG ATTCGGGAAA TCTTCGGATA GATCGTCGTG GATCCTTGAT GATGACTTTT ATGCCTGCTA TTGGTGAGCG TAAGTACGAC TGGGAAAAGA AACAGAAATT TGCTTTGTCA CCTACGGAAG TTGGATCCTT GATTAGCATG GGTTCCAAAG ACAGCTCTGA GTTTTTCCAT GACCCTTCCA TGAAATCAAG TAATGCTGGT CAAGTCAGGA AGTCATTGTC AATTAAGCCC CACGCAGATG GTAGCGGCTA CTTCATCTCG TTGAGCGTAA ACAATAGCAT CCTCAAAACC AATGACTATT TTGTGGTTCC TGTCACAAAA GCTGAATTTG CAGTGATGAA GACAGCTTTT AGTTTTGCCC TTCCACACAT CATGGGTTGG AATCGGTTAA CAGGTCAAGG TAATACTGAA GCGCTGCCAC CGAGGAATCT TACTCATCTA AAGACCGATC CACAGTTAGA GCTGGAGTGG GATAAATGAA CTGATGGAGT AGTAGGAACG |
| Length | 770 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 13974705.. 13976309 |
| Download Sequence |
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| A.thaliana |
|---|
| AGI-code | AT1G71260.1 |
| Description | WHIRLY 2 |
| TAIR curator summary | Encodes WHY2, a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to mitochondria and not the nucleus. WHY2 is a member of the Whirly family proteins present mainly in the plant kingdom performing various activities related to DNA metabolism. Crystal structure of Solanum tuberosum WHY2, a close homolog of Arabidopsis WHY2, reveal that Whirly proteins bind to single strand DNA to promote accurate repair of DNA double-strand breaks over an error-prone repair pathway. |
| Alias | [ATWHY2][WHY2][WHIRLY 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6 |
Ahg904629 | pumilio 24 |
| 13.7113 |
Ahg496029 | Protein kinase protein with tetratricopeptide repeat domain |
| 14.6969 |
Ahg471898 | KU70 homolog |
| 16.9706 |
Ahg470642 | Ribosomal protein S5/Elongation factor G/III/V family protein |
| 19.799 |
Ahg489491 | Glutamyl/glutaminyl-tRNA synthetase, class Ic |
| 21.166 |
Ahg472063 | actin-related protein 4 |
| 26.4953 |
Ahg487703 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 30.7734 |
Ahg494932 | B-cell receptor-associated protein 31-like |
| 36.1801 |
Ahg933429 | Tim10/DDP family zinc finger protein |
| 37.4833 |
Ahg312583 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
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| Growth Chamber expression |
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