Detail


ID : Ahg926523

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926523|scaffold_202084.1
Sequence
CCGATCTTGT CAACCAAAAA AATGGCGATC AAGACAAAGA CTAGTCTGAT TCCAAGTTGT TCATCACCGG AGGATCTAAA ACGCGTTTTG CAAACGCTAG GTTCGAGCTG GGGAGATGTA GTTGAAGATC TGGAACGTCT TGAGGTTGTT CCGTTAAAAG GAGCTATGAC TAACGAGGTT TATCAGATTA ATTGGCCTAC TTTAAACGGC GAAGATGTTC ACCGGAAAGT TCTTGTTCGG ATCTACGGTG ACGGCGTTGA CCTTTTCTTT AACAGAGATG ATGAAATCAA AACCTTTGAG TGTATGTCTC ATCATGGTTA TGGTCCTAAG CTTCTTGGTC GCTTCTCTGA TGGTCGTCTT GAAGAATTTA TCCACGCAAG AACTCTTTCT GCAGATGATC TTCGTATCGT AGAAACATCT GATTTCATTG CTGCGAAACT AAGAGAGTTT CATAAGCTTG ATATGCCTGG TCCAAAGAAC GTTCTTCTCT GGGAAAGACT CAGGACTTGG CTTAAGGAGG CTAAGAACTT GGCTTCACCA ATAGAGATGG ATGAGTATCG GTTGGATGTT ATGGAAGATG AAATCAATTT GTTGGAAGAG AGACTTACTA GGGATGATCA AGAGATTGGT TTCTGTCACA ACGATCTTCA GTACGGAAAT GTCATGATTG ATGAAGAAAC CAACGCCATT ACCATCATAG ACTATGAGTA TTCGAGTTTC AACCCAATTG CTTATGACAT TGCAAACCAC TTCTGTGAAA TGGCTGCTAA TTACCATTCA GACACTCCTC ATGTTCTGGA TTACACTCTA TATCCAGGAG AAGAAGAAAG GAGAAGGTTC ATTAGAACAT ATCTTGGCTC TACAGGGAAT GCAACAAGTG AGGGAGAAAT AGAGAGGTTA TTGACTGATG CAGAGAGCTA CACTTTAGCA AACCATATCT TCTGGGGATT ATGGGGAATC ATCTCGGGAC ATGTGAACAA GATTGAGTTC GATTACATGG AATATGCAAG GCAGAGATTT GAACAGTACT GGCTTAGAAA GCCTTTGCTT CTGGATTTAC CTTGAAGGAT GAAGCAGATT CGCAT
Length1085
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14123592.. 14125314
Download Sequence
A.thaliana
AGI-codeAT1G71697.1
Descriptioncholine kinase 1
TAIR curator summaryEncodes choline kinase. mRNA levels are increased in response to wounding.
Alias[ATCK1][CK][CK1][choline kinase 1][CHOLINE KINASE]
Gene coexpression
MR
MR Locus Description
14.8661 Ahg887308
23.8328 Ahg322779 Protein of unknown function (DUF707)
32.6803 Ahg483400 NAC domain containing protein 42
34.8712 Ahg935611 cyclic nucleotide gated channel 3
44.441 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
45.6727 Ahg472361 Protein kinase family protein
47.6025 Ahg486718 P-glycoprotein 21
48.1664 Ahg312360 Protein of unknown function (DUF1262)
50.3786 Ahg318977 O-acetylserine (thiol) lyase (OAS-TL) isoform A2
50.6952 Ahg471920 glutathione S-transferase TAU 24
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression