Detail



ID : Ahg926585

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926585|scaffold_202146.1
Sequence
TGTTTTGATT GTTTTCTTTA ATGGCGAAGA AGAAGCATCG CAAGCTCTTC CCTACCTTAG CATCAGAGAC AAACAAAACG TTAGACTGCT CGAACGGAGT CTGCGACCCG ATTTGCCCTT ACAATTGCTA TCCAGAACCC GATTACTCCG CCATATCACC ACAGCTCCCT CCATGGTCAT CGTCACCAGC TCCATCTCCA TCTCCATCTC CATCAATCTC AGCCGTTTAC CAACCATCTC AAAACTCATC ATCTTCCTTG GACGCCATAA GCATCATCAC CATAACCGGT GCGGTCTTAG CCATCCTTTT AACCGGATTC TTTCTTGTAG CGAAATTCGT TTCAGACAGC GTAAACCGTG ACAACCACGG AAGATATCAG TCCGATAACG AAGACAACGA CACGGTAATG GGAGAAGAGT TTCAAGATAG GGAACAAGTG GATCACCCAA TATGGTTAAT CAGAACAACA GGTCTACAAC AATCGATCAT AAACTCGATT ACGATCTGTA ATTACAAGAG AGGAGATGGT TTAATCGAGA GAACAGATTG TCCTGTTTGT TTAAACGAGT TTGAAGAAGA TGAGAGTCTT AGGTTATTGC CTAAATGTAA CCACGCTTTT CACATCTCTT GTATTGATAC TTGGCTTAGT TCTCACACCA GTTGTCCTCT GTGTCGTGCT GGTATTGCGA TGATCAGTGT TACCACTCCA CGGTGTTCCG GTCCGGTCGA TGTAACTCCG GGAGGACTAG GCTCACATTT GGAAAACGAT GGAGTTGGTG AAGAAGGTCA AGATCATCTT GGGAGAGAGA GGGATGAATC TGATTTCAAA GAGAGGGATG ATTCAGACAA CAGAGACCTG AATTCAGATG TAAGAATTGA GATTAATCGG GGTTTGGAGG AAATCGACGG TGATGGATCT GAAACAGAGA AGAAAGAGAA AGTTAGGGTT TTTAGAGAGT GTATGGATTC AAATGAAGCA GATTCGATTA ATTCTCTCTC GCATATGAAA ACCCATAAAG AAAGTGTCGA TTTTCCGGGA AAATCATGCG AGAATCAGAG TCAGGAATTC ACCAGACCCA ACGGAGAAGA CGAAGCAAGC TGCTCTGAGG AAAACGGTGG TCACGTCGAC CAATTACGGA GAAGTTGTGA TTCCATTGAT TCTGGTGAAT TGAACGGCGA AAGAACCGAA GAAACAGAGA AAAGCCAGTC AGACATTTCA TCGAGCACGT TGAAGACAAA TGGAAGCTCC TCCTCAGTAT CATGTTTGTA CAAAAACAAG AGTTCGATTT TTCCGCTGTA GTAAAAAGTC TCTACCAAAA C 
Length1321
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14404880.. 14406214
Download Sequence
A.thaliana
AGI-codeAT1G72220.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.5742 Ahg483400 NAC domain containing protein 42
24.8193 Ahg483895 myb domain protein 2
29.8998 Ahg946749 Uncharacterised protein family (UPF0497)
35.8329 Ahg354029
45.3652 Ahg476076 NAC-like, activated by AP3/PI
49.295 Ahg486058 Ca-2+ dependent nuclease
56.921 Ahg493603 S-locus lectin protein kinase family protein
60.1332 Ahg322779 Protein of unknown function (DUF707)
60.5475 Ahg491871 casein kinase I-like 4
63.0159 Ahg936786 HXXXD-type acyl-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression