Detail



ID : Ahg927471

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927471|scaffold_203032.1
Sequence
ATTGCAAAAT CTCGATCGAA ATGGGTTCGT TCGGGATGCT TTCGAGGAGA ACCTTGGGCA CCGATATGCC CGTCATGGCT CAGATTCGGA GTTTAATGGC GGAATTGACG AACCCCATGT CTCTCGCCCA GGGAGTGGTG CATTGGCAGC CTCCCCAAAA GGCCTTAGAC AAGGTCAAGG ACCTTGTTTG GGATCCTATG GTTAGTAATT ATGGCCCCGA TGAAGGTCTT CCCGAGTTAA GACATGCTCT TCTCAATAAG CTGCGTGTAG AAAACAAGCT TACCCAATCA CAAGTGATGG TTACTGCAGG TGCCAATCAG GCGTTTGTTA ACCTTGTTAT CACATTATGT GATGCTGGTG ATTCTGTTGT CATGTTTGAG CCATACTACT TCAATTCCTA CATGGCCTTT CAGATGACAG GAGTCACCAA CATAATTGTT GGCCCTGGCC AGTCAGACAC TCTCTATCCT GACGCAGACT GGTTAGAGAG GACACTCTCT GAGTCTAAAC CAACCCCAAA AGTTGTAACT GTTGTGAATC CTGGTAACCC AAGCGGCACC TATGTCCCTG AACCGCTTCT TAAGAGGATT TCACAAATAT GCAAAGATGC AGGGTGTTGG CTGATTGTAG ATAACACATA CGAGTATTTC ATGTATGACG GTTCAAAACA TTCTTGCGTT GAGGGAGACC ACATTGTTAA TGTCTTCTCT TTCTCTAAAA CCTACGGCAT GATGGGTTGG AGGCTTGGAT ATATAGCTTA CTCAGACAGA TTAGATGGGT TTGCAACAGA GCTTGTGAAA ATTCAAGACA ACATACCAAT CTGTGCCGCC ATAATCTCGC AGCGACTGGG TCTATACGCA TTAGAGGAAG GTTCTGGGTG GATAACGGAA CGGGTAAAGA GCCTAGTGAA GAACCGGGAT ATTTTGAAAG AGGCGCTTGA GCCGCTGGGG AAGGAGAACG TTAAGGGAGG AGAAGGAGCG ATTTACCTGT GGGCGAAACT ACCAGAGGGA CACAGAGATG ATTTCAAGGT GGTGCGGTGG CTGGCTCACC GCCATGGTGT GGTGGTGATC CCGGGGTGTG CAAGTGGTGG CCCCGGGTAT CTCCGGGTTT CCTTTGGAGG GTTGCAAGAG GTTGAAATGA GAGCTGCAGC GGAGAGGCTG AGGAAAGGAT TAGAGGAGCT GCTTCACCAT GGAATGGTGG AGTGAGATGT TGTTAAAAGG GGCAA 
Length1225
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17989724.. 17991666
Download Sequence
A.thaliana
AGI-codeAT1G80360.1
DescriptionPyridoxal phosphate (PLP)-dependent transferases superfamily protein
TAIR curator summary
Alias[VAS1][reversal of sav3 phenotype 1]
Gene coexpression
MR
MR Locus Description
9.21954 Ahg487778 Octicosapeptide/Phox/Bem1p family protein
9.27362 Ahg494501 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
10.9545 Ahg480941 Protein of unknown function (DUF3353)
13.8564 Ahg496651 Octicosapeptide/Phox/Bem1p family protein
14.1421 Ahg482340 Nucleic acid-binding, OB-fold-like protein
18.868 Ahg492373 ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein
19.3649 Ahg350459
19.5448 Ahg478924 Class I glutamine amidotransferase-like superfamily protein
34.322 Ahg478006 multifunctional protein 2
40.6448 Ahg331709 vacuolar protein sorting 26A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression