Detail



ID : Ahg927678

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927678|scaffold_300135.1
Sequence
TTTCATTGCA GAGGCAAAAA AAATGGTGAA GATCTGCTGC ATTGGAGCTG GTTATGTTGG TGGTCCAACT ATGGCTGTCA TTGCTTTGAA ATGTCCATCT GTTGAAGTTG CTGTTGTTGA TATCTCTGTT CCACGGATCA CTGCTTGGAA CAGTGACCAG CTTCCTATCT ATGAGCCGGG CCTCGATGAT GTTGTTAAGC AATGCCGTGG CAAGAACCTC TTCTTTAGTA CTGATGTGGA GAAACACGTG AGAGAAGCTG ATATCGTCTT TGTCTCTGTG AATACCCCGA CTAAGACTCG TGGTCTTGGA GCTGGTAAAG CTGCTGATTT GACTTACTGG GAAAGCGCAG CTCGGATGAT TGCTGATGTT TCGGTTTCTG ACAAGATCGT TGTCGAGAAA TCAACTGTCC CTGTCAAAAC CGCTGAAGCT ATTGAGAAGA TTCTGATGCA CAACAGTAAA GGAATCAAGT TCCAGATTCT TTCCAACCCT GAGTTCCTTG CTGAAGGAAC CGCTATTGAA GATCTTTTCT ATCCTGACCG TGTTCTCATC GGTGGTCGTG AAACACCCGA AGGGTTTAAA GCTGTCAAAG CCTTAAAAGA CGTTTATGCT CAGTGGGTTC CAGAAGATAG AATCCTAACC ACTAATCTCT GGTCCGCTGA GCTCACCAAG CTTGCTGCCA ACGCATTCTT AGCCCAAAGA ATCTCATCTG TCAATGCAAT GTCTGCTCTC TGTGAAGCCA CTGGTGCGAA TGTCTCTGAA GTCTCCTATG CTGTTGGTAA AGACTCTAGA ATCGGTCCCA AGTTCTTGAA TTCGAGTGTC GGCTTTGGTG GCTCCTGTTT CCAGAAAGAT ATCCTCAACT TAGTCTACAT CTGTGAATGC AACGGCCTCC CTGAAGTAGC GGAATACTGG AAACAAGTCA TCAAGATCAA TGACTACCAG AAAACCCGGT TTGTAAACCG CATTGTGTCC TCGATGTTCA ACACCGTTTC CAACAAAAAG ATTGCCGTCC TCGGGTTCGC CTTCAAGAAA GATACCGGAG ACACGAGAGA GACTCCAGCC ATTGATGTCT GCAAAGGTTT GTTAGGAGAC AAAGCCCGAA TCAGCATCTA TGATCCACAA GTCACTGAAG AACAGATCCA AAGAGACTTA ACCATGAACA AATTCGACTG GGACCATCCA ATTCACCTTC AACCCATGAG TCCAACCACT GTGAAACAAG TCTCAGTCGT TTGGGACGCC TATGCTGCCA CTAAAGATGC CCATGGAATC TGCTTGTTAA CGGAGTGGGA CGAGTTTAAG TCGCTTGACT ATGAGCGTAT CTTTGAAAAT ATGCAGAAAC CAGCGTTTGT CTTCGATGGC AGAAATGTTG TTGATGCAGA GAAGCTGAGG AAGATAGGGT TTATTGTTTA CTCTATTGGT AAGCCATTGG ACCAGTGGCT CAAGGACATG CCTGCTCTTG CTTAGCTTTG AGTTTTTGCC AATTCT 
Length1486
Protein Sequence
Protein Residue
Map Locationscaffold_3: 402018.. 403510
Download Sequence
A.thaliana
AGI-codeAT5G15490.1
DescriptionUDP-glucose 6-dehydrogenase family protein
TAIR curator summary
Alias[UGD3][UDP-glucose dehydrogenase 3]
Gene coexpression
MR
MR Locus Description
3 Ahg496587 chromatin remodeling 24
23.6643 Ahg950033 SPFH/Band 7/PHB domain-containing membrane-associated protein family
24.6171 Ahg923117
31.6228 Ahg481718 Argonaute family protein
37.0135 Ahg944081 Ribonuclease III family protein
37.6962 Ahg476486 RNA-binding (RRM/RBD/RNP motifs) family protein
38.7427 Ahg948460 decapping 5-like
39.3446 Ahg490602 expansin-like A2
39.6485 Ahg925447 RNA polymerase subunit alpha
41.1825 Ahg491806
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression