Detail



ID : Ahg927779

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927779|scaffold_300236.1
Sequence
TTTGAGGAAG AAGAAGAAGA AGATGAAGTA CAAGCGTAAG CTAAGTCTCT CTGTTGTCTT CTTCTTCGTC TTCTATCTCG CGGCGGTGAC TTCAGATCTA GATTCTGACC GGAGAGCTTT ACTCGCTGTT CGTAATAGTG TTCGTGGCCG TCCTTTGTTA TGGAACATGA GTGCTTCTTC TCCTTGTAAT TGGCACGGAG TCACTTGCGA TGCGGGTCGG GTCACGGCTC TCCGATTACC CGGCGCTGGT TTATTCGGTT CTTTACCCAT CGGTGGAATT GGTAATCTAA CCGAGCTTAA GACTCTCTCT CTCCGATTCA ATTCTCTCTC TGGTCCAATC CCTGCGGATT TCTCAAACCT TGTTCTCCTC CGTTACTTGT ATCTCCAAGG TAATGACTTT TCCGGTGAGA TTCCGTCGTT TCTCTTCACG CTTCCAAACC TAATCAGACT TAATCTTGGG GAGAATAAGT TCTCGGGTCG GATCCCGGAT AATGTCAATT CTGCAACCCG GTTGATTACT CTGTATTTAG AGAGGAATCA ACTCTCAGGT CCGATCCCTG AGATCACGCT TCGTCTTCAA CAGTTCAATG TTTCTTCTAA TCAATTAAAC GGATCGATTC CGAATTCGTT GTCGACTTGG CCTCGAACCG CTTTTGAAGG GAACACTCTC TGTGGGAAGC CCTTAAACAC TTGTGAGGCA GAGAGCCCCA ATAGTGACGC TGGAGGTCCC AATACGCCGC CGAAGGAAAA GGATAGCGAC AAATTATCCG CCGGAGCTAT TGCCGGAATT GTGATCGGAT GTGTTGTTGG TCTATTGCTG CTTCTTTTGA TTCTGTTCTG TCTCTGTAGA AAGAGAAAGA AAGAAGAGAA CGTTACAGCT AGAAATGTTG AAGCTCCTGT CGCCGCTCCG ACCTCCTCAG CTGCTATACC CAAGGAAAGG GTGGTTGATG TCCCGCCGGC GAAGGCTACG GCTTCGGAGA GTGGTGTGGT GAGTAAAGAT TTGACCTTTT TCGTGAAATC TTTCGGGGAA TTCGATTTGG ATGGATTGTT GAAGGCTTCA GCTGAGGTCC TTGGGAAAGG AACAGTTGGG TCTTCGTATA AGGCAAGCTT TGATCATGGA TTAGTGGTGG CTGTGAAGCG TTTAAGAGAC GTTGTGGTGC CTGAGAAAGA GTTCAGAGAG AGATTGCAGG TTTTGGGATC AATGAGTCAT GCCAATCTTG TGACTCTGAT CGCTTACTAT TTCAGCCGCG ACGAGAAGCT TCTTGTCTTT GAGTACATGT CTAGAGGAAG CTTGTCTGCG CTATTGCACG GGAACAAAGG AAACGGGAGA ACTCCGTTGA ACTGGGAAAC TAGAGCCGGT ATAGCCGTAG GAGCTGCAAG AGCGATTAGC TACCTACATT CGCGTGATGC CACAACTTCT CATGGAAACA TTAAGTCCTC GAACATACTA TTATCTGACT CCTATGAAGC TAAGGTCTCT GATTACGGTC TTGCTCCTAT CATTAGTTCT ACATCTGCAC CTAACCGTAT TGATGGCTAC CGTGCCCCTG AAGTCACCGA TGCTCGCAAA ATCTCCCAAA AAGCTGATGT CTATAGCTTT GGCGTCCTAA TCCTTGAATT ACTCACAGGT AAGTCTCCAA CGCATCAGCA ATTGAATGAA GAAGGTGTCG ATTTGCCAAG ATGGGTCCAA TCTGTTACCG ATCAACAATC ACCGTCCGAT GTGCTTGATC CCGAGCTCAC AAGGTACCAA CCTGAGGGCA ATGAGAACAT CATTCGTTTA TTGAAGATCG GTATGAGTTG TACGGCTCAA TTCCCAGATA GTCGTCCTTC AATGGCCGAA GTCACCAGAC TCATTGAGGA GGTTTCCCAT TCATCTGGCT CCCCAAATCC AGTATCCGAC TGATTTTTGG GGGTCTAAAT TGATTG 
Length1926
Protein Sequence
Protein Residue
Map Locationscaffold_3: 729591.. 731820
Download Sequence
A.thaliana
AGI-codeAT3G02880.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.68115 Ahg479890 Leucine-rich repeat protein kinase family protein
12.6491 Ahg477551 cellulose synthase-like D3
13.4164 Ahg492097
15.2315 Ahg471972 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
28.9828 Ahg487084 Concanavalin A-like lectin protein kinase family protein
30.3974 Ahg482474 Exostosin family protein
31.5278 Ahg473664
33.9117 Ahg333105 3-ketoacyl-CoA synthase 20
37.1483 Ahg479220 novel plant snare 13
37.5233 Ahg475633 phloem protein 2 A5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression