Detail



ID : Ahg929107

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929107|scaffold_301564.1
Sequence
AGAAAAAAAG AACACAAAAA ATGACAATCT CAGAGACATC GAGATCAAGC CACGAGCTCC CATTAACAAC AGCCGAATCA AGCGGAAACA GAGCAACCGC TAAGAAACTG ACTTTGATCC CTTTGGTTTT CCTTATTTAC TTTGAGGTCG CTGGTGGTCC ATTTGGTGAA GAACCGGCGG TTCAAGCGGC TGGACCGCTT TTAGCGATTC TCGGTTTCCT TATCTTCCCT TTCATTTGGA GTGTCCCTGA GGCCCTAATC ACCGCTGAGC TCTCCACTGC GTTTCCAGGC AACGGAGGGT TTGTGATATG GGCACATCGG GCATTTGGTT CTTTCGTGGG CTCAATGATG GGTTCGTTGA AGTTCCTGAG TGGTGTGATT AACGTTGCTT CGTTTCCTGT ACTCTGTGTT ACTTACTTGG ATAAGCTATT CCCTGTTCTT GAATCCGGAT GGCCCCGAAA TGTCTGCATT TTCGCCTCAA CGGTGGTCTT ATCTTTCTTA AACTATACTG GCTTAGCCAT TGTGGGTTAC GCAGCTGTCG TTCTCGGTCT GGTGTCTCTC TCGCCTTTCC TTGTTATGTC GGCTATGGCA ATCCCTAAGA TCAAACCTCA CCGTTGGGGT AGCTTAGGAA ACAAGAAAAA AGATTGGAAT CTCTACTTCA ACACACTCTT TTGGAACTTG AATTTCTGGG ACAATGTCAG TACTCTTGCA GGGGAAGTGG ACGAGCCTCA AAAGACATTC CCGTTGGCGC TTCTTATCGC TGTGATCTTC ACTTGTGTTG CTTACTTGAT TCCTCTTTTC GCTGTCACGG GTGCAGTCTC AGTAGATCAG AGCAGATGGG AAAACGGGTT TCACGCAGAA GCAGCTGAGA TGATTGCAGG GAAATGGCTG AAAATATGGA TTGAGATCGG CGCTGTCTTA TCAAGTATCG GACTTTTCGA AGCTCAGTTA AGCAGTAGTG CTTATCAGCT GGAGGGGATG GCGGAAATGG GGTTCCTGCC TAAATTCTTT GGGGTACGAT CGAAATGGTT CAACACCCCT TGGCTCGGGA TTCTAATCTC AGCTCTCATG TCGCTCGGAT TATCATACAT GAACTTCACA GACATCATAT CCTCGGCAAA TTTCTTGTAC ACTTTAGGGA TGTTTCTAGA GTTTGCGTCT TTCATTTGGT TAAGAAGAAA ACTACCTGGT TTAAAGAGAC CTTACCGAGT TCCGCTGAAA ATACCGGGGC TGGTGGTTAT GTGCTTGATA CCTTCGGCGT TTCTAGTGCT GATTATAGTG TTTGCTACTA AGATCGTGTA CCTTATTTGC GGTGTAATGA CCATAGGAGC TATCGGTTGG TACTTCTTGA TCAACTACTT CAGGAAGAAG AAGATCTTCG AATTCAACGA AGTTATTGAT GATCTTGACA ACAATGTCAA CGGAGAACAT CCCAAAGTCG ATGATCACAA TTCATGATAG ATTTAAACAG AGGATAT 
Length1477
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5253008.. 5254677
Download Sequence
A.thaliana
AGI-codeAT3G13620.1
DescriptionAmino acid permease family protein
TAIR curator summary
Alias[PUT4][POLYAMINE UPTAKE TRANSPORTER 4]
Gene coexpression
MR
MR Locus Description
8.77496 Ahg488487 O-acyltransferase (WSD1-like) family protein
9.48683 Ahg922353 Basic helix-loop-helix (bHLH) DNA-binding family protein
10.3923 Ahg494591 MATE efflux family protein
11.3137 Ahg951510 HXXXD-type acyl-transferase family protein
12.8452 Ahg484885 farnesoic acid carboxyl-O-methyltransferase
13.2288 Ahg487652 porphyromonas-type peptidyl-arginine deiminase family protein
14.3178 Ahg488052 mechanosensitive channel of small conductance-like 10
15 Ahg476200 TIFY domain/Divergent CCT motif family protein
16 Ahg489781 Arginase/deacetylase superfamily protein
16.9706 Ahg492412 Phosphorylase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression