Detail



ID : Ahg929301

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929301|scaffold_301758.1
Sequence
TTGGAGCGAA GGACCGATAA ATATGGCGTC GGCGTCCTCG TCTGACGGAG TTGCCGGAAG GATTCAGAAC GCTTCTTTGG TTCTTGTCTC CGATACCAAT TCCACGCTTG CTGATATCCG CAAAGCTGTG GCAATGATGA AGAACATTGC TGTTCAATTG GAGAAAGAAA ATCAAACTGA CAAGGTCAAG GACCTTGAAA ATTCTGTGGC TGAGCTATTG GATTTGTATA GTGATTGTAA TCACCGTTCG TCAGCAATTC AATCCGTTGC AAATGGTTAC CAACCCGGGG AACAGTTAAC GGACTTTCAA AAGTTGCTTG ATTTTGAATT CACAAAACTC AAGGCTACAC CTTCTGTGCC GCAAAATGAT CATTTGATGC GTCAGTTCAG GGAAGCAGTT TGGAACGTTC ATCATGCAGG TGAACCAATG CCTGGTGACG ATGAAGAGGA CATTGTCATG ACCAGTACTC AGTGCCCTCT GCTAAACATG ACGTGTCCCT TGAGCGGGAA GCCTGTCACT GAACTAGCAG ATCCAGTTCG CAGTATGGAT TGCAGGCACG TCTATGAAAA AGCTGTAATC CTGCATTACA TAGTCAACAA TCCAAACGGG AATTGTCCTG TAGCAGGATG CCGAGGTAAA CTGCAGAACA GCAAAGTGAT TTGTGATGCA ATGTTGAAGT TTGAAATCGA GGAGATGCGC TCGTTGAACA AACAATCTAA TAGGGCTGAA GTGATTGAAG ACTTCACAGA AGATGTCGAT GAAGATTAGA GATCAAACAT ATCTTAGACG GGGT 
Length794
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5995704.. 5997628
Download Sequence
A.thaliana
AGI-codeAT3G15150.1
DescriptionRING/U-box superfamily protein
TAIR curator summaryEncodes a SUMO E3 ligase that regulates endocycle onset and meristem maintenance.
Alias[ATMMS21][HPY2][MMS21][A. THALIANA METHYL METHANE SULFONATE SENSITIVITY 21][HIGH PLOIDY2][METHYL METHANE SULFONATE SENSITIVITY 2]
Gene coexpression
MR
MR Locus Description
18.7617 Ahg949661 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
19.6214 Ahg329810 O-Glycosyl hydrolases family 17 protein
24 Ahg951176 SPT4 homolog 2
25.7876 Ahg904725 cation/H+ exchanger 19
42.6146 Ahg923384 presequence protease 2
48.3735 Ahg335156
58.2409 Ahg496360 DCD (Development and Cell Death) domain protein
58.7878 Ahg476620 Homeodomain-like superfamily protein
82.0244 Ahg481599 C2H2 zinc-finger protein SERRATE (SE)
82.0488 Ahg919726 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression