Detail



ID : Ahg929759

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929759|scaffold_302216.1
Sequence
AAGAACGGAA AAATCATCAG ATGGGTCGAC TAGATGTAGC TGCGGCGAAG AGAGCTTACC GGAAAGCAGC GGAAGTGGGT GACCGGAGGG AAGAAGCGAG GTGGGCCAAC AATGTCGGCG ATATCCTTAA GAATCATGGA GAGTACGTTG ATGCTCTCAA GTGGTTTAGG ATCGATTACG ATATCTCCGT CAAGTATTTA CCTGGGAAAG ATTTGTTACC TACTTGTCAG TCTCTTGGCG AGATCTATCT CCGTCTCGAG GATTTCGAAG AAGCCTTGAT TTATCAGAAG AAGCATTTAC AGCTAGCTGA AGAAGCTAAT GACACTGTGG AGAAGCAACG AGCATGTACT CAACTTGGTC GTACCTACCA TGAGATATTC TTGAAGTCTG AGGATGATTG TGAAGCCATT CAGAGTGCTA AAAAGTACTT TAAGAAAGCC ATGGAACTTG CACAGATTCT CAAGGAGAAA CCACCTCCTG GTGAATCTAG AGGATTTCTT GAGGAATATA TTAATGCACA TAACAACATC GGTATGCTTG ACCTTGATCT TGATAATCCT GAAGCAGCCT GCAGTATTCT GAAGAAAGGG CTGCAGATTT GCGATGAAGA GGAGGTGAGA GAATATGATG CTGCGCGGAG TAGGCTTCAT CATAACCTTG GAAATGTTTT TATGGTGCTG AGAAGTTGGG ATGAAGCAAA GAAACACATC GAGATGGATA TTAATATCTG TCATAAGATC AATCATGTCC AAGGAGAAGC CAAGGGATAT ATCAATCTAG CTGAATTACA CAACAAGACC CAAAAGTACA ATGATGCACT TTTATGTTAT GGTAAAGCTT CTACGCTAGC GAAATCTATG CAAGACGAGA GTGCATTGGT TGAACAGATA GAGGATAATA TCAAGATAGT CAAGAAATCC ATTAAAGTTA TGGAAGAATT GAGAGAAGAA GAGCTTATGC TTAAGAAGTT GTCTACAGAA ATGACTGATG CCAAAGGCAC TTCGGAGGAA CGAAAGTCTA TGCTCCAAGT ACATGCTTGT CTTGGACGTC TTATTGATAA ATCTAGCATG GTATTCGCAT GGCTGAAGCA TCTTCAATTT TCAAAAAGGA AGAAGAAAAT ATCAGATGAA CTCTGTGACA AGGAAAAGCT TAGTGATGCC TTCTTGATTG TTGGAGAATC TTACCAAAAT CTCAGAAATT TCAGAAAATC CCTGAAGTGG TTCAATAGAA GTTATGAGGG ATATGAAGCA ATCGGTAATC TGGAGGGTCA AGCACTAGCG AAAATTAATA TTGGTAATGG TTTGGACTGT ATTGGGGAAT GGACAGGAGC ACTCCAGGCA TATGAAGAGG GATACAGAAT TGCTTTGAAA GCTAATCTTC CTTCAATTCA GCTTACTGCA CTGGATCATA TGCACTATAG CCATATGATG AGATTTGGGA ATGCTCAAAA AGCCAGGGAA TTGAAGGACA AAATACAAAA TCTGAAGGAG TCAGAACATA CTGAGAAAGC CGAATGTAGT ACACAAGATG AATGCTCTGA AACCGAGTCA GAAGGGCATG GGAATATATC AAATGATAGG CCAAATGCAT GTGGCTCACC AGAACCCCAA ACACCAAATT CACTTAGATC AGAACGGTTA GCAGATCTGG ATGAAGCAAA TGATGATGTG CCTCTAATTT CATTTCTCCA GCCTGGAAAA CGTCTGTTCA AAAGGAAACA AGTTTCAGGA AAACAAGATG TTGACACTGA TCAGACTAAG AAAGATTTCT CTATAGTAGT AGACTCTCAG CAGACAGTTG TTGGTCGCAA GCGTATTCGT GTAATCCTCT CTGATGATGA AAGTGAAACC GAATATGAGT TGGGATGCCC TAAAGACAGT TCTCACAAAG TTCTAAGGCA GAATGAGGAG GTTTCTGACG AAAGTATGTA TTTTGATGGT GCTGTTAATT ATACGGATAA TCGTGCCATC CAAGATAATG TAGAAGAAGG TTCTTGCTCG TATACGCCTC TCCATCCCGT TAAGGTGGCT CCAAATGTCA GCAATTGTAG ATCTTTGAGC AACAATATAG CTGTTGAAAC AACTGGTTGT AGTAAAAGAG GATCTCGATG TGATGCTGGC GACTCCAACG GCACGCACTG CAAAACTGGA GCTGCTCTCG TGAACTTCCA CGCTTACTCA AAAACTGAGG ATCAAAAAAT AAAAATTGAA ATTGAAAATG AACACATAGC TTTAAACTCC TGTTCTCACA ATGATGAGTC TGTGAAGGTG GAACTTACTT GCCTATACTA TTTACAGCTT CCTGTCGATG AGAAAGCTAA AGGTCTGTTG CCGATCATTC ATCATTTGGA ATATGGTGGA AGAGTTCTGA AACCATTGGA TTTATATGCG ACTCTCAGGG GCTCTTCTCA AAATGTTGTT ATTGAAGCTT CCATTAATGG CTGGGTTCAC AAGCGCCTGA TGAAACTATA CATGGACTGT TGCCAGTCGT TGTCAGAGAA ACCCAGTATG AAATTGCTTA AGAAATTATA TATTTCGGAG GTAGAGGATG ATATCAATGT GTCAGAATGT GAACTGCAAG ACATATCAGC TGCTCCATTA TTGTGTGCCC TCCATGTCCA CAATACAGTT GCTATGTTGG ATCTCTCCCA CAATATGCTA GGGAATGGAA CAATGGAGAA ATTGAAACAA CTCTTTGCCT CATCAAGCCA GATGTATGGT GCTTTAACTT TGGATTTGCA CTGCAATCGA TTTGGTCCAA CTGCTTTGTT TCAGATCTGT GAATGCCCTG TGTCCAGGAA TCGACTTACA GATGCTTGTG GATCATACCT CTCAACTATA GTGAAAAATT GCCGGGCACT TTACAGCTTG AATGTGGAAC ATTGTTCACT AACATCAAGA ACAATCCAAA AAGTTGCTAA TGCTTTGGAT TCGGAGTCAG GACTTTCACA ACTCTGTATA GGTTATAATA ATCCTGTTTC AGGGAGTAGT ATTCAAAACC TCTTGGCTAA ATTGGCTACT CTAAGCAGCT TTGCAGAACT GAGCATGAAT GGCATAAAGC TGAGCAGCCA AGTTGTTGAT AGCCTTTCTG CACTTGTTAA GACTCCATCT CTGTCAAAAC TATTGGTTGG CAGCAGTGGA ATAGGAACGG ACGGAGCTGT AAAAGTCACT GAATCTCTAT GTTATCTGAA GGAAGAAACT GTGAAGCTCG ACCTTTCGTG TTGTGGACTA GCGTCCCCTT TCTTTATTAA GCTCAACCAA GATATTACTC TAACTTCTAG CATTCTTGAG CTTAATGTTG GAGGAAATCC AATCACCGAA GAGGGAATCA GTGCACTTGG GGAGCTGCTT AGGAATCCTT GTTCAAACAT AAAAGTTCTT ATTCTAAACA AGTGTCATTT GAAGCTCGGT GGACTTGTAT GCATAATTCA AGCACTTTCA GATAATAAGA ATCTTGAAGA GCTTAATCTT TCTGAGAATG CTAAGATAGA TGAGACTGTG TTTGGCCAAC CTGTGAAGGA ACATGGAACA TGTGAATCTG TAACCTCAAT GGACAAAGAA CAAGAGCTAT GTGAAACCAA TATGGAGTGT GATGATCTCG AAGTTGCAGA CAGCGAAGAT GAGCAAATAG AGGAACGAAC TGCAACCTCC AGTAGTCTTA GTTTACCACG CAAGAACCAT ATCGTGAAAG AGATTTCTAT CGCTCTTGCA ATGGCTAACC AGTTGCAGAT TCTGGACCTA AGCAACAATG GGTTCTCAGT CGAAGGCTTG GAAACATTAT ACATGTCATG GTCATCATCA AGCTCCCGAA CTGGCATAGC TCAAAGGCAT GTGAAAGATG AGATTGTCCA TTTTTATGTG GAAGGAAAGA TGTGTTGCGG AGTCAAATCA TGCTGCAGAA AGGACTGAAG AAGATCTTCC TTGTCTGAC 
Length3929
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7582034.. 7589159
Download Sequence
A.thaliana
AGI-codeAT3G18730.1
Descriptiontetratricopeptide repeat (TPR)-containing protein
TAIR curator summaryEncodes a protein with an important role in cell division control and plant morphogenesis and may also play a role in genome maintenance. May be involved in mitosis through interaction with TSA1. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis.
Alias[BRU1][MGO3][TSK][BRUSHY1][MGOUN3][TONSOKU]
Gene coexpression
MR
MR Locus Description
10.583 Ahg474153 Protein kinase family protein with ARM repeat domain
18.8414 Ahg945124 glycine-rich protein
19.7484 Ahg944901 SET domain group 4
21.8403 Ahg949774
28.931 Ahg487987 myb domain protein 3r-4
29.7321 Ahg476654
30.249 Ahg330601 Galactose oxidase/kelch repeat superfamily protein
30.5123 Ahg478762
38.6782 Ahg331330 methyltransferase 1
40.4969 Ahg934079 FAD-binding Berberine family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression