| Annotation |
|---|
| Description | jgi|Araly1|929807|scaffold_302264.1 |
| Sequence |
GGAAGGAAAC AACAAAGAAG ATGGTTTTTC CCTGGAACAT TGCTAAATCA GCGGAGGAAG CTTTTTCTAG ATGGGCGGTG AAGAGGGTCG TCAAATTCTT GTTGAAGAAG AAATTGGGTA AACTCATACT TGGTGATATC GACCTTGATC AGCTCGATAT TCAGCTTCGT GATGGCTCTA TTCAGCTCTC CGATCTTGCT ATCAACGTTG ACTATTTTAA TGACAAGTTT GATGCTCCGC TACTCATAAA GGAAGGCTCA ATTGGAGCTT TGGTAGTTAA AATGCCTTGG AAGACTAATG GTTGTCAAGT TGAGGTTGAC GAGCTTGAGC TTGTTCTTGC ACCACGTTTG GAGACTAATG CATCATCTTC AAATGAAGCC AGCACCTCCG CCTCTACCCG AGAAGATTCA CATAATATAC GTCTTGAAAG AGGAAAGCAT GAGAATGAGA TGTTGTTGAA CGCTGCAAAA TCTGCGTCTA TCGATGTCCA TGAAGGCGTT AAGACGGTTG CCAAGATAGT GAAATGGTTT CTTACAAGTT TTCATGTCAA AATTAAGAAT CTGATTATAG CATTTGATCC CGATTTTGGC CAAAAACTGA ATGAAGCTGG TCCTCGGCCA ACATTGGTAC TTAGAATGAC AGAAATAGAG TGTGGAATTT CAGAGGACCG AGTTTCGGCT GCTGATGTTT CTCCTGATAG TTTCCTTGGT ACTAGTCGAC TTGCAAACTG TGTGAAATTT CAAGGAGCCG TCGTAGAGCT TTTAAATATG GATGATGATG ATGGCGACAA AACTTGTGGT AAAAAAACAT CAAATGATGT GACTTTGATC ATGACCGGCG AAGGAGGTGG CTTTTCAGGG AGTTTGAATT TTAGTATACC CTGGAAGAAT GGTTCTTTAG ACATTCGCAA GGTGGATGCT GATATTTCTA TTGATCCTGT TGAAGTACGA CTTCAACCGT CTACAATTAG ATGGTTCTTA CAATTGTGGA AGACTTTCAC AAGTTTCGGA TCAGACTGTT GCCCATCAGT TTCTCATTCT GATTCATTGA CAGATTCACC TACAATACCT ACTAATGTAA TGGTAACGCC TCCAGCTACA CTATCATTGT CAGGTGGCCA AGAATTGGAG CCTGATACTA CACCTAACTT ACAGTTTATA CCGGATTGGT TTCCGTCTTC TTTCAGCAAG AAAGAAGAGG ATGGAGAAGT AGATATTGGG GCAAGTGTGG ACCAGTTTTT TGAATGTTTT GATGCAATGA GGAGTTACCA ATCAGCTTCT GGAAGCCAAG GAATGTGGAA TTGGACATCT TCTGTCTTCA CAGCAATCAA TGCTGCATCT AGCCTTGCTT CTGGGTCTTT GCTTCTTCCT TCTGAACAAC AACATGTTGA AACAAGTTGT AAAGTATCCT TTGCTGGAGT TTCGGTGGTA TTATTTTTCC AAGATGAAGA CAATTGGAAG GATGTTTCCA CGCGGATTCA CTACTTGGGT GCAGAACTCA GAGATATTTC GGTCTCTTTT CAGGTATGCC CTCATGATCT GAGGTTAGAA GGAGAAGTGA ACAGCATGGA GATCGCCGAT TATTTTCAAG CTGGAAATGT TGTTGACACT GCTAATGCTG AATCTCAGAC TTGTTTGATT AAGGATTTAC AAGCGAAAGT TCAGACTAGT CTTCCTCCCT TTGCCTCGTC TGATATGCAT ACTGACTCTG AAAGATTAAG CGAGATAGTT TCTGATGGAT TTCTCTTTCG TAGCAAGGGT TTCGCAGTCA AGACATTGTT GGTTATAGCT GCAGGGGGCA GTGGATTTCA GTTTTTTGTC AATTTCCAAT CATCCAAAGC CAGCCATAGA GGATCAAACT CATTCTCGTT GAGTTTACCA CCTACCACAT TCTGGCTGAA CCTTCATTCA GTAGAAATGT TGGTAGATCT TTTCAACGAT GTATCCGAAT CTATCCCCAT ATTCAGTCAT GAAAGGAATC AGGTGGCATC CTCTTCTAAA TCAGAAAGTT TGCGAGGTAG TGTGTCAATC GGGAATGCTC GAGTGATTCT GTGGTTTCCT TTTGAGAGCA TTTCAGAAAG GTTATGTAAC TCGCTTGGTG AGCAGTTTAT TGTTGTCGAC TTATCTTCCT CTCCGCCATC TGACAAGGAT AGGCGTAAGG AAGGAAGTCC GGGAGAAATG TACTTTACAT CGGCTACTCG CTCTATATGC TTCAGTGTCG GTGATGCTAG CATCTATTTG GTTACTTCTG ACCTTAAAGA TTCTGAAACA AATTCATATC ATAGGCAGGT TGAATTCTCT GCATATAATA TTTTACATAC CAACAATAAA ACGAGGCACC AACTTTCAAC CATTGGTATG TTTTGGCAAG ATAGACCTAC TGTTAGCCCT TGGTTAGTGG AGAGAGCTAA GATGTTGGCT ACGCAGGAAG AATCTATTCA GACAGATAAA TCTGGGGGGA GTGGCCTTGA GTTTGCTGCT GTTGCTACGC CCAAAGATCA AGAAGACATC TACTCTCGAA CCAGGAAAGA AATAATTTTG GCTTCTTCAT TCTGCCTTTA TCTTCATTTG CTTCCACTTG CTATCCGTTT AGATGGTTGG CAATACAGCA AATTATGTAA TCTCGTAGAA GAGGCAAAAA TTTGGCTATC ACGTATGGCA GCCAATACGG CTGAGCAAAC AGGGGAATCT GTTGTGTGTC AAACGTCTCT CGTTGTTGAA TGTGATTCTA TTGACATTTT GGTTAGGCCA GAACCTCAAA TGGGCATAAA AATTCAGCTT CAGACTGAGC TTCCTGGATC ATGGATTCAG TTCAACCTGA GGGTTCAGAA ATTAAATCTT ATGTCTGTCT CAAATCTTGG CAGTATCTCT GGTGCTGATT TCTTTTGGTT AGCCCATGGG GAAGGCACCT TATGGGGTTC TGTTACAGGT CTAGCTGACC AGGAACTGCT ATTACTCTCA TGTAACAATT CTGCAATCAA GCGTGGTAAT GGAGGAGGTT CAAATGCATT GTCGTCAAGG TTCGCTGGCT TAGATTTTCT GCACTTACAG GAACCAGGAA TTTGTTATGA TTATGTAGCA GTATCTGCCA GGGGCTGTAC GATCTCGGCC GTAGGAGGAC GCCTGGATTG GATAGAAGTG GTTACTTCTT TTTTCACATT TGAAGATGAA AAAAAATCTC AAGAGATGAA CTCCAGCTCA TCTAGCGGCT CCTCGTTTAT TCTGAATTTG GTTGATGTTG GTCTAAGCTA TGAGCCCCAC CATGAGAATA CAGATCATTT ACGTCAAGCA AGTATTCCAT GGGTTGCCTG TCTGGTAGCT GCATCTTCTT TTAGCCTTTC AAAGAAAAGT CTGGTTGATT CCATAAGAAA TGATTATAGA ATCAGGATTC AAGATCTTGG GCTTCTTCTG TCCGTGGATT TTGACCTTAG CAAGCTTAAT GGAACGTACA GTTCAGAGCA TCTTCATGAG ACTGGCTATG TTAAAGTTGC TAATGAGGCG CTTATTGAAG CAATTCTAAG GACTAACTCT GAAAATGGCC TTCTTTGGGA GTTAGAGTGT TCCAAATCTC ACTTATTAAT TGAAACTTGC AGTGACACGA CTTCTGGTTT GATTCGCTTG GCCACCCAGC TCCAACAGTT ACTTGCTCCT GATTTGGAGG AATCAGCTGT GCACTTGCAG ACTCGATGGG ACAGCATTCA GCAGGCAAAT GCTAGGAATG ATTTTGATAT CAGCGATAGA CTCAGTAGCT CCGATTCAAG TGGAGAAATG AAATATTTAA GATTAGAGTC AGAAAATGAA ACTGGGGTCA TTGGTTTGAT GGACGAAATA AATGAAGATG CATTTCAATT TGATGTCAAT CTGACAGGTC AGTCTGACTC TGTGGAATGT CAGAATAACT ATATGTCACC TCATGGAATC TCTCATGGGC AGGCATATAA TTGGGTACCT GCTACTCCTG AGAAACTACC TTCTAATCAC AGTATCTGTG GGTCATCATC TAGAATAAAT TCAGAAAGCA GTAAAATATT CCTAGATAGA GAGAGCCTGC CTGAAATATT TGAAAACTAT TGTTTGTCTG AGTTCCGTCC ATCGTCAGAG GTACCTCAAG AAGGGGATTC ATCAGGGAGA GAATTGTTTC CTGAGACTGA TCTGAGGAGA GGAAATTCTG GGTGGTATGA TGACGGGTCC TTAAGAATTT TAGAAGACCA TGTGTCAGAA GCAACTGAGG AAGATCATGA GGAACATATT CTGGATGGAG ATTTTTCATC TTTTGGCCAG ACGTCTTATT CTGCTGTAGC AGCTAATGGA CGTATCCTTC TGAAAAACAT TGACCTCAAA TGGAGAATTT ACTCTGGGTC TGATTGGCAT GATTCTAGAA AGAAAGGTGA AAATTTTAAA CATACAAAGG GCCGGGATAC AACTTCGTGC CTTGAGCTGG AGTTATCTAG GGTCCTTGGA TATTACAACT CAAAAGATCA CCCAAGAGAT TCCTCTTCAT ATGCTTTCAA GTTGGAATTA AAAGCTGTCA GACCTGACCC TGAGACGCCA CTTGAGGAAA ACCGCTTCTT TGGAGCTAAC AGCCTAGAAA AGCCTGATGT TTCCATGCGA GACTCAGGTG GTTCAACATT GTCGGTTTCT GTTAAAGGAC ATAATATCAT AGAAGAAGCG CTTCTTCCAT ATTTCCAGAA ATTTGACATA TGGCCTGTTA GTGTTCGAGT TGATTACAGT CCCCATCATG TTGATATAGC AGCACTAACA GGAGGGAAAT ATGCAGAGCT TGTGAACCTT GTACCCTGGA AGCATCATTT GCTCATCACA GAGGAATATA TGCAGGGGAT TGAATTACAG CTCAAACATG TGCATGCTGC TGGAATCTAT GGCTGGGGAA ATGTATGTGA GACTATACTG GGAGAATGGT TGGAAGATGT ATCTCAGAAT CAGATTCATC AACTGTTAAA GGGGATCCCA ACAGTAAGAT CACTTTCTGC TCTTTATGCT GCTGCTCTAA AGCTGGTCTC GTCACCTGTT GAAAGTTACA GGAAAGATCG AAGGCTAGTG AAGGGAGTCC AAAGAGGTAC TATAGCGTTT CTCAGAAGCA TCTCACTGGA AGCTGTTGGA CTCGGTGTTC ACTTGGCAGC CGGGGCTCAT GATATTTTAT TGAGAGCAGA ATATATATTT GCAAGTGCAC CATCATTGCC ACAACCCCAA GGCAAAACGA AGACGAATGT TAGACATAAT CAGCCTAGAA ACGCTAAGCA AGGCATGCTT AAGGCATGTG AGAGCATCGG TGATGGAATA GGAAAGACAG CTTCTGCATT AGTCCGCACA CCTTTGAAGA AGTATCAACG TGGAGACGGA GCTGGATCAG CATTTGCAAC AGTTGTTCAG GGAGTTCCAA CAGCTGCTAT AGCACCTGCT TCAGCTTGTG CTAGAGCTGT ACATAGTGCT CTAGTTGGCA TCAGAAATAG GTTAGTTCAT ATTAAATATT GTGGAAATAC GGCTGGAAAA ATCTGTTATT TGCAAAGTAT TAAAGACTCA TGGAGATTAT TATCTCTACT TTCAGTCTTG ATCCTGAACA TAAAAAGGAA TCCATGGAAA AGTACTTAGG CCCTGATAAA CAAAGGAAG |
| Length | 5629 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 7795286.. 7803380 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G19190.1 |
| Description | autophagy 2 |
| TAIR curator summary | Encodes autophagy-related 2 (ATG2). |
| Alias | [ATATG2][ATG2][AUTOPHAGY 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 11 |
Ahg489919 | Protein kinase superfamily protein |
| 13.6382 |
Ahg329104 | dentin sialophosphoprotein-related |
| 16 |
Ahg350885 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 17.6635 |
Ahg491431 | ENTH/VHS/GAT family protein |
| 18.3303 |
Ahg486559 | |
| 21.4709 |
Ahg478682 | multidrug resistance-associated protein 3 |
| 34.2783 |
Ahg477824 | receptor like protein 30 |
| 37.3363 |
Ahg895977 | RNA polymerase II transcription mediators |
| 37.9473 |
Ahg912447 | Family of unknown function (DUF572) |
| 38.1838 |
Ahg910280 | ARM repeat superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|