Detail


ID : Ahg929959

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929959|scaffold_302416.1
Sequence
CGAATTAGCA TCCCGCCAGA ATGTCTATTG CGTCATCACT TTCTTCAGCC ACACTTTGCG GCGCCTCAGT TTTTCCTAAA GCATTAGGCT ACAGCTCTGA GTTCCCAAGC AATCTTCCCA GTCCTTCTGA AAGTTCAAAG ATTTGTTTGA CTTCATTTCC TGCCTCTAGG GATCCCAAGA AAAATGCTAC TTGGAATCTA ACCCGAAATG TTGGTCCGAT CCAAGGAATC AGGTGTCATG CTATGCAAGC TGGAACGAGG GAATTGAAGA AATTTGAACT TAGTGATGTG ATTGAAGGGA AACAATTTGA TAGGGAGATG CTAAGCGCTA TATTCGATGT TGCACGAGAA ATGGAAAAGA TAGAAAAGAG CTCTTCCCAA AGTGAAATCC TCAAGGGTTA TTTAATGGCT ACCCTCTTTT ATGAGCCTTC TACCCGTACC AGGCTTTCAT TTGAATCTGC CATGAAACGC CTTGGAGGTG AAGTCTTAAC TACTGAGAAC GCTAGAGAGT TTTCGTCTGC CGCAAAAGGG GAAACACTTG AAGACACAAT AAGAACAGTG GAGGGTTATT CAGATATAAT TGTGATGCGA CATTTTGAAA GCGGTGCTGC AAGAAAAGCT GCAGCTACTG CCAATATACC TGTCATTAAT GCAGGTGATG GTCCTGGAGA GCATCCTACT CAGGCTCTAT TGGACGTCTA TACAATCCAA AGTGAAATTG GAAAATTAGA TGGCATCAGT GTAGCCTTAG TTGGAGATCT TGCCAACGGA AGGACAGTCC GGTCTCTTGC ATACTTGCTT GCCAAGTTTA AAGACGTGAA GATCTACTTT GTTTCCCCTG AAATTGTGAA AATGAAGGAT GATATAAAAG ACTATTTGAC ATCAAACGGG GTCGAATGGG AAGAAAGTTC GGATTTAATG GAAGTAGCAT CCAAGTGTGA TGTAGTTTAT CAAACCCGAA TCCAAAGAGA GCGGTTTGGA GAAAGGCTTG ACCTTTATGA AGCAGCTCGT GGGAAGTATA TCGTGGACAA GGATCTATTA GGAGTGATGC AGAAAAAAGC TATTATCATG CATCCTTTAC CAAGATTGGA TGAAATCACT GCAGATGTTG ATGCTGATCC AAGAGCTGCC TACTTCAGAC ATGCTGATCC AAGAGCTGCC TACTTCAGAC AAGCAAAGAA CGGTTTGTTC ATTAGAATGG TTCATGGTCG TTAAGTTAAA TCCTTTAATG AACT
Length1234
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8363701.. 8365335
Download Sequence
A.thaliana
AGI-codeAT3G20330.1
DescriptionPYRIMIDINE B
TAIR curator summaryencodes aspartate carbamoyltransferase catalyzing the second step in the de novo pyrimidine ribonucleotide biosynthesis
Alias[PYRB][PYRIMIDINE B]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg334100 lactoylglutathione lyase family protein / glyoxalase I family protein
10.6771 Ahg909999 GTP binding Elongation factor Tu family protein
11.6619 Ahg492732 Transducin/WD40 repeat-like superfamily protein
11.9583 Ahg946278
19.4422 Ahg931722 anaphase promoting complex 10
21.3542 Ahg319835
23.2164 Ahg944981
24.7386 Ahg473448 plastid developmental protein DAG, putative
27.7849 Ahg929675 nuclear RNA polymerase D2B
28.8444 Ahg936457 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression