Detail



ID : Ahg930108

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930108|scaffold_302565.1
Sequence
TCTCTGATCC ATCTTCGGAA ATGGAAATAA GTTTCAGCTT TAATGAAGCC CATGCACCTG TTACAATTAA CGTTCCGGCT AATGTTGGTT TTACAATTAA TGTTAAACCT GTTGCCGGAC ACGTACCACC CGTTGGTGGA GGTGGTGGCG GATTAAACGT TAATGTTCTT CCTCCGGCTG GTGGAGGTGG TGGTGGCGTT GAACAAGTAG TAAAGGCTAA TCCTAAAGTT TTTTTTTATT TGGCCGTGGA CGGCAGACTG GCTGGTCGGA TCGTGATTGA GCTCTTTGCA GATACGACCC CGCGAACGGC AGAGAACTTC CGGGCCCTAT GTACCGGGGA GAAAGGGATG GGGAAGCTTG GTAAGCCACT CCACTACAAG GGATCAATCT TCCACCGTCT TGTCCCCTAT CAAATGTTCT GTGGAGGAGA TATCACTGCT GGTAATGGAA GTGGAGGCGA ATGCATCTAC GAAGATAGAT TTTTCGAGGA TGAGAACTTC ATCAGGCAGC ACACCGGTCC AGGTTTCATC TCCATGGAAA ACCGTGGTCC AGACACCAAC GAATCTGGGT TCTTGATCGG CCTGCAGGAG GACAGTTTAC TTGGCCGCGA GACCGTCGCT TTCGGTCAAG TTGTTCAAGG ATTGACTCTG CTCAATGCCT TAAGTAGAGA GCTTGGAAAT CGTAACAACA AGCCTTCCAA GCCCCTGGTG ATCGCTGACT GCGGTCAAAT CTCATAGATC TTGGTGAGTT TTATCCT 
Length757
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8984678.. 8985423
Download Sequence
A.thaliana
AGI-codeAT3G21481.1
Description
TAIR curator summaryPseudogene of AT4G34870; ROC5 (ROTAMASE CYP 5); peptidyl-prolyl cis-trans isomerase
Alias
Gene coexpression
MR
MR Locus Description
4.47214 Ahg895446 cytochrome P450, family 706, subfamily A, polypeptide 7
9.38083 Ahg918906 Plant invertase/pectin methylesterase inhibitor superfamily protein
12.1244 Ahg898770
14.4222 Ahg901205 FBD-like domain family protein
14.6969 Ahg916422 low-molecular-weight cysteine-rich 12
18.3303 Ahg946654 Plant self-incompatibility protein S1 family
20.4939 Ahg921882 Plant self-incompatibility protein S1 family
22.7156 Ahg891189
25.4558 Ahg888176
25.7488 Ahg943339
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression